RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 CRELD2Q6UXH1 353 aaPredicted RBP13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 ZNF720Q7Z2F6 126 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 KREMEN2Q8NCW0 462 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 DHX58Q96C10 678 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 RIPOR3Q96MK2 946 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 MYADMQ96S97 322 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 ST6GALNAC4Q9H4F1 302 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 STK39Q9UEW8 545 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 CCDC39Q9UFE4 941 aa13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 CPSF3Q9UKF6 684 aaKnown RBP13.81□□□□□ -0.2
CHRNA3-208ENST00000561128 NOTCH4Q99466 2003 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 DOCK8Q8NF50 2099 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 TBC1D4O60343 1298 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 PPP6R2O75170 966 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 ADRB2P07550 413 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 CLTAP09496 248 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 OR1D2P34982 312 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 ZXDAP98168 799 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 VARS2Q5ST30 1063 aaKnown RBP13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 JADE1Q6IE81 842 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 POTEHQ6S545 545 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 SV2BQ7L1I2 683 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 APBB1IPQ7Z5R6 666 aaPredicted RBP13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 EFCAB13Q8IY85 973 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 GPR65Q8IYL9 337 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 GRAMD1CQ8IYS0 662 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 CMASQ8NFW8 434 aaPredicted RBP13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 SMG7Q92540 1137 aaKnown RBP13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 EDAQ92838 391 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 KIF12Q96FN5 646 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 ASIC4Q96FT7 647 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 UROC1Q96N76 676 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 MSTO1Q9BUK6 570 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 PCDHA7Q9UN72 937 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 CDY1Q9Y6F8 540 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 STYXL1Q9Y6J8 313 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 CLUHO75153 1309 aa13.8□□□□□ -0.2
CHRNA3-208ENST00000561128 SPDYE4A6NLX3 237 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 PRR33A8MZF0 331 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 H0YCG3 227 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 SPTLC1O15269 473 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 CUTAO60888 179 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 ZMYND10O75800 440 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 VNN2O95498 520 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 HSP90AA1P07900 732 aaKnown RBP13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 ALADP13716 330 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 IDEP14735 1019 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 HOXD13P35453 343 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 TXLNAP40222 546 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 ATAT1Q5SQI0 421 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 C15orf39Q6ZRI6 1047 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 CCDC73Q6ZRK6 1079 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 TDRD5Q8NAT2 981 aaKnown RBP13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 RSAD2Q8WXG1 361 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 SUSD3Q96L08 255 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 ZNF396Q96N95 335 aaPredicted RBP13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 NECTIN4Q96NY8 510 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 SLC38A7Q9NVC3 462 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 KBTBD4Q9NVX7 518 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 HCFC1R1Q9NWW0 138 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 LIMD1Q9UGP4 676 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 SSX2IPQ9Y2D8 614 aa13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 TIMM13Q9Y5L4 95 aaPredicted RBP13.79□□□□□ -0.2
CHRNA3-208ENST00000561128 WDR27A2RRH5 827 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 CCL16O15467 120 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 PRPF6O94906 941 aaKnown RBP13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 GCNT3O95395 438 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 C8AP07357 584 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 LRPAP1P30533 357 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 CDR1P51861 262 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 ROR1Q01973 937 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 PPP2R3AQ06190 1150 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 RAB33AQ14088 237 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 L1TD1Q5T7N2 865 aaKnown RBP13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 TRIM67Q6ZTA4 783 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 CCDC149Q6ZUS6 474 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 SLC7A14Q8TBB6 771 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 FAM212AQ96EL1 285 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 SAAL1Q96ER3 474 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 CBWD1Q9BRT8 395 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 TRIM9Q9C026 710 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 MRPL44Q9H9J2 332 aaKnown RBP13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 WDR6Q9NNW5 1121 aaKnown RBP13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 OLFML3Q9NRN5 406 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 PANK4Q9NVE7 773 aa13.78□□□□□ -0.2
CHRNA3-208ENST00000561128 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 GOLGA8IPA6NC78 632 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 TMEM221A6NGB7 291 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 GOLGA8JA6NMD2 632 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 M0R296 226 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 TRIOO75962 3097 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 SEC24AO95486 1093 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 OR4Q2P0C623 313 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 MCM4P33991 863 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 SCN1AP35498 2009 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 AARSP49588 968 aaKnown RBP eCLIP13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 PTPRJQ12913 1337 aa13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.21
CHRNA3-208ENST00000561128 MRPL58Q14197 206 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms