RNA–Protein interactions for RNA: ENST00000561036.1

HDDC3-206, Transcript of HD domain containing 3, humanhuman

TSL 3

Gene HDDC3, Length 457 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-206ENST00000561036 OSTNP61366 133 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 PTPN11Q06124 597 aaPredicted RBP18.4■□□□□ 0.54
HDDC3-206ENST00000561036 KCNA10Q16322 511 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 SLC10A6Q3KNW5 377 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 RNF180Q86T96 592 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 ZNF677Q86XU0 584 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 GLYCTKQ8IVS8 523 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 EFCAB13Q8IY85 973 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 SLAIN1Q8ND83 568 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 EPS8L1Q8TE68 723 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 TSPAN18Q96SJ8 248 aa18.4■□□□□ 0.54
HDDC3-206ENST00000561036 CELF4Q9BZC1 486 aaKnown RBP18.4■□□□□ 0.54
HDDC3-206ENST00000561036 APOBEC3GQ9HC16 384 aaKnown RBP18.4■□□□□ 0.54
HDDC3-206ENST00000561036 NOCTQ9UK39 431 aaKnown RBP18.4■□□□□ 0.54
HDDC3-206ENST00000561036 M0QZ92 97 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 SGPL1O95470 568 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 ASGR1P07306 291 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 GZMAP12544 262 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 CYP11B1P15538 503 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 PDE6CP51160 858 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 MRPS6P82932 125 aaKnown RBP18.39■□□□□ 0.53
HDDC3-206ENST00000561036 CDR2Q01850 454 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 SERINC5Q86VE9 423 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 TMEM192Q8IY95 271 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 FAM84AQ96KN4 292 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 CALR3Q96L12 384 aaKnown RBP18.39■□□□□ 0.53
HDDC3-206ENST00000561036 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.39■□□□□ 0.531e-56■■■■■ 327
HDDC3-206ENST00000561036 GINS2Q9Y248 185 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 JRKLQ9Y4A0 524 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 NUB1Q9Y5A7 615 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 PCDHB2Q9Y5E7 798 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 ANK1P16157 1881 aa18.39■□□□□ 0.53
HDDC3-206ENST00000561036 CTIFO43310 598 aaKnown RBP18.38■□□□□ 0.53
HDDC3-206ENST00000561036 NPTXRO95502 500 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 CST3P01034 146 aaPredicted RBP18.38■□□□□ 0.53
HDDC3-206ENST00000561036 TMEM253P0C7T8 217 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 KRT5P13647 590 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 CHRNB2P17787 502 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 ACO1P21399 889 aaKnown RBP18.38■□□□□ 0.53
HDDC3-206ENST00000561036 FGFR4P22455 802 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 ATICP31939 592 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 MYL6P60660 151 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 YWHAEP62258 255 aaKnown RBP18.38■□□□□ 0.53
HDDC3-206ENST00000561036 TMEM132DQ14C87 1099 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 PAPD7Q5XG87 772 aaKnown RBP18.38■□□□□ 0.53
HDDC3-206ENST00000561036 GDF6Q6KF10 455 aaPredicted RBP18.38■□□□□ 0.53
HDDC3-206ENST00000561036 NOP9Q86U38 636 aaKnown RBP18.38■□□□□ 0.53
HDDC3-206ENST00000561036 RPUSD2Q8IZ73 545 aaKnown RBP18.38■□□□□ 0.53
HDDC3-206ENST00000561036 PPP1R13LQ8WUF5 828 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 TSEN34Q9BSV6 310 aaKnown RBP18.38■□□□□ 0.53
HDDC3-206ENST00000561036 NIF3L1Q9GZT8 377 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 ISCUQ9H1K1 167 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 CDC23Q9UJX2 597 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 TRPV2Q9Y5S1 764 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 MRFAP1Q9Y605 127 aa18.38■□□□□ 0.53
HDDC3-206ENST00000561036 MEFVO15553 781 aaPredicted RBP18.37■□□□□ 0.53
HDDC3-206ENST00000561036 RTN2O75298 545 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 MOCS3O95396 460 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 NFICP08651 508 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 YARSP54577 528 aaKnown RBP18.37■□□□□ 0.53
HDDC3-206ENST00000561036 JADE1Q6IE81 842 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 SPOPLQ6IQ16 392 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 SLC47A2Q86VL8 602 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 UBR7Q8N806 425 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 SLC20A1Q8WUM9 679 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 PACSIN1Q9BY11 444 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 XYLT2Q9H1B5 865 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 FAM124BQ9H5Z6 455 aaPredicted RBP18.37■□□□□ 0.53
HDDC3-206ENST00000561036 VRTNQ9H8Y1 702 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 ITGA11Q9UKX5 1188 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 PCDHGC5Q9Y5F6 944 aa18.37■□□□□ 0.53
HDDC3-206ENST00000561036 ANKRD62A6NC57 917 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 MOXD2PA6NHM9 499 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 DYNC1I1O14576 645 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 NCANO14594 1321 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 STAU1O95793 577 aaKnown RBP18.36■□□□□ 0.53
HDDC3-206ENST00000561036 PRLRP16471 622 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 GALCP54803 685 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 AMPD2Q01433 879 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 TCEAL1Q15170 157 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 ZNF699Q32M78 642 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 FAM47CQ5HY64 1035 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 TMEM40Q8WWA1 233 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 DDX1Q92499 740 aaKnown RBP18.36■□□□□ 0.53
HDDC3-206ENST00000561036 SALL4Q9UJQ4 1053 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 TSKSQ9UJT2 592 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 PCDHB4Q9Y5E5 795 aa18.36■□□□□ 0.53
HDDC3-206ENST00000561036 TRIP12Q14669 1992 aaPredicted RBP18.35■□□□□ 0.53
HDDC3-206ENST00000561036 INHAP05111 366 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 ZNF132P52740 706 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 NAP1L1P55209 391 aaKnown RBP18.35■□□□□ 0.53
HDDC3-206ENST00000561036 FMO1Q01740 532 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 WHAMMP3Q1A5X7 153 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 PPP1R2P3Q6NXS1 205 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 TRIM72Q6ZMU5 477 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 C1orf127Q8N9H9 656 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 ZNF296Q8WUU4 475 aaPredicted RBP18.35■□□□□ 0.53
HDDC3-206ENST00000561036 CTNNBL1Q8WYA6 563 aaPredicted RBP18.35■□□□□ 0.53
HDDC3-206ENST00000561036 SNX27Q96L92 541 aa18.35■□□□□ 0.53
HDDC3-206ENST00000561036 ARID3AQ99856 593 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms