RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 ROR1Q01973 937 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 TMEM132AQ24JP5 1023 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 TPGS2Q68CL5 300 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 C1orf228Q6PIY5 440 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 MAEAQ7L5Y9 396 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 APBB1IPQ7Z5R6 666 aaPredicted RBP20.41■□□□□ 0.86
TPM1-226ENST00000560959 DDX1Q92499 740 aaKnown RBP20.41■□□□□ 0.86
TPM1-226ENST00000560959 MSANTD3Q96H12 275 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 NACC1Q96RE7 527 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 CORO1BQ9BR76 489 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 TRPV4Q9HBA0 871 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 BRMS1Q9HCU9 246 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 GDAQ9Y2T3 454 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 VWA8A3KMH1 1905 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 F5P12259 2224 aa20.41■□□□□ 0.86
TPM1-226ENST00000560959 PRRG1O14668 218 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 PAPSS2O95340 614 aaPredicted RBP20.4■□□□□ 0.86
TPM1-226ENST00000560959 IGFBP6P24592 240 aaPredicted RBP20.4■□□□□ 0.86
TPM1-226ENST00000560959 TXKP42681 527 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 EFNA5P52803 228 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 NR5A1Q13285 461 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 PPP2R5AQ15172 486 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 CSRP2Q16527 193 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 XKR4Q5GH76 650 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 PPM1JQ5JR12 505 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 CYP4A22Q5TCH4 519 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 CATSPER3Q86XQ3 398 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 LEMD2Q8NC56 503 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 SMARCD2Q92925 531 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 SEMA4GQ9NTN9 838 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 PDRG1Q9NUG6 133 aa20.4■□□□□ 0.86
TPM1-226ENST00000560959 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.4■□□□□ 0.86
TPM1-226ENST00000560959 A0A087WWV3 80 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 WDR27A2RRH5 827 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 FAM205CA6NFA0 338 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 H7C4K7 107 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 SYN3O14994 580 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 NEMFO60524 1076 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 CHRNB1P11230 501 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 CYP11B2P19099 503 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 MRPL58Q14197 206 aaKnown RBP20.39■□□□□ 0.85
TPM1-226ENST00000560959 GRM2Q14416 872 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 EEF1DP3Q658K8 133 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 PDZD4Q76G19 769 aaPredicted RBP20.39■□□□□ 0.85
TPM1-226ENST00000560959 SPEM1Q8N4L4 309 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 C3orf58Q8NDZ4 430 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 DEPTORQ8TB45 409 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 E2F7Q96AV8 911 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 TCEAL4Q96EI5 215 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 POLR3CQ9BUI4 534 aaPredicted RBP20.39■□□□□ 0.85
TPM1-226ENST00000560959 GPR88Q9GZN0 384 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 SLC38A7Q9NVC3 462 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 PIAS3Q9Y6X2 628 aa20.39■□□□□ 0.85
TPM1-226ENST00000560959 SMIM28A0A1B0GU29 152 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.38■□□□□ 0.85
TPM1-226ENST00000560959 PFKFB2O60825 505 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 GDI1P31150 447 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 BRCC3P46736 316 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 SIM2Q14190 667 aaPredicted RBP20.38■□□□□ 0.85
TPM1-226ENST00000560959 IQCEQ6IPM2 695 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 VITQ6UXI7 678 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 ALKAL1Q6UXT8 129 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 PRR23CQ6ZRP0 262 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 MFSD6LQ8IWD5 586 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 ELMOD1Q8N336 334 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 BSNDQ8WZ55 320 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 CYP4F11Q9HBI6 524 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 TOPORSQ9NS56 1045 aaPredicted RBP20.38■□□□□ 0.85
TPM1-226ENST00000560959 ORC3Q9UBD5 711 aaPredicted RBP20.38■□□□□ 0.85
TPM1-226ENST00000560959 INSL5Q9Y5Q6 135 aa20.38■□□□□ 0.85
TPM1-226ENST00000560959 ZNF263O14978 683 aa20.37■□□□□ 0.85
TPM1-226ENST00000560959 CCR2P41597 374 aa20.37■□□□□ 0.85
TPM1-226ENST00000560959 EPHA5P54756 1037 aa20.37■□□□□ 0.85
TPM1-226ENST00000560959 LPAL2Q16609 132 aa20.37■□□□□ 0.85
TPM1-226ENST00000560959 GLRA4Q5JXX5 417 aa20.37■□□□□ 0.85
TPM1-226ENST00000560959 ATF7IP2Q5U623 682 aa20.37■□□□□ 0.85
TPM1-226ENST00000560959 PADI6Q6TGC4 694 aa20.37■□□□□ 0.85
TPM1-226ENST00000560959 PRR23BQ6ZRT6 265 aa20.37■□□□□ 0.85
TPM1-226ENST00000560959 ZNF512Q96ME7 567 aaPredicted RBP20.37■□□□□ 0.85
TPM1-226ENST00000560959 TNFSF13BQ9Y275 285 aa20.37■□□□□ 0.85
TPM1-226ENST00000560959 ARNTLO00327 626 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 HRO43593 1189 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 CTDNEP1O95476 244 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 EDN1P05305 212 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 MUTP22033 750 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 HOXA6P31267 233 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 RPL9P32969 192 aaKnown RBP20.36■□□□□ 0.85
TPM1-226ENST00000560959 YARSP54577 528 aaKnown RBP20.36■□□□□ 0.85
TPM1-226ENST00000560959 SATB1Q01826 763 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 PTGDRQ13258 359 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 NT5DC1Q5TFE4 455 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 LONP2Q86WA8 852 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 CHAMP1Q96JM3 812 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 ZSWIM3Q96MP5 696 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 USP20Q9Y2K6 914 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 CFAP47Q6ZTR5 3102 aa20.36■□□□□ 0.85
TPM1-226ENST00000560959 I3L4J1 428 aa20.35■□□□□ 0.85
TPM1-226ENST00000560959 NRG2O14511 850 aaPredicted RBP20.35■□□□□ 0.85
TPM1-226ENST00000560959 MOSPD3O75425 235 aa20.35■□□□□ 0.85
TPM1-226ENST00000560959 MED24O75448 989 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms