RNA–Protein interactions for RNA: ENST00000560559.1

BLM-209, Transcript of Bloom syndrome RecQ like helicase, human

TSL 3

Gene BLM, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BLM-209	ENST00000560559	FZD1	Q9UP38	647 aa		5.23	□□□□□ -1.57
BLM-209	ENST00000560559	SORCS3	Q9UPU3	1222 aa		5.23	□□□□□ -1.57
BLM-209	ENST00000560559	ATP8A1	Q9Y2Q0	1164 aa		5.23	□□□□□ -1.57
BLM-209	ENST00000560559	COMMD10	Q9Y6G5	202 aa		5.23	□□□□□ -1.57
BLM-209	ENST00000560559	PLEKHG2	Q9H7P9	1386 aa		5.23	□□□□□ -1.57
BLM-209	ENST00000560559	ADAMTS7	Q9UKP4	1686 aa		5.23	□□□□□ -1.57
BLM-209	ENST00000560559	PHRF1	Q9P1Y6	1649 aa	Known RBP	5.23	□□□□□ -1.57
BLM-209	ENST00000560559	TNRC6C	Q9HCJ0	1690 aa	Known RBP	5.22	□□□□□ -1.57
BLM-209	ENST00000560559	ATP7B	P35670	1465 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	KANK1	Q14678	1352 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	CCDC163	A0A0D9SF12	145 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559		M0R2C6	588 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	LMNA	P02545	664 aa	Known RBP	5.22	□□□□□ -1.57
BLM-209	ENST00000560559	HNRNPL	P14866	589 aa	Known RBP eCLIP	5.22	□□□□□ -1.57
BLM-209	ENST00000560559	PROZ	P22891	400 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	SOX5	P35711	763 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	BCAR1	P56945	870 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	MRPS21	P82921	87 aa	Known RBP	5.22	□□□□□ -1.57
BLM-209	ENST00000560559	UBE4A	Q14139	1066 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	CCDC142	Q17RM4	750 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	C4orf46	Q504U0	113 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	HSP90AB3P	Q58FF7	597 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	DNTTIP2	Q5QJE6	756 aa	Known RBP	5.22	□□□□□ -1.57
BLM-209	ENST00000560559	HTR3D	Q70Z44	454 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	BMP8A	Q7Z5Y6	402 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	ZSWIM2	Q8NEG5	633 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	FRAT1	Q92837	279 aa	Predicted RBP	5.22	□□□□□ -1.57
BLM-209	ENST00000560559	EPC1	Q9H2F5	836 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	PTGFRN	Q9P2B2	879 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	PNPLA7	Q6ZV29	1317 aa		5.22	□□□□□ -1.57
BLM-209	ENST00000560559	CDC42BPG	Q6DT37	1551 aa		5.21	□□□□□ -1.57
BLM-209	ENST00000560559		H7C1D1	291 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	SCAF4	O95104	1147 aa	Known RBP	5.21	□□□□□ -1.58
BLM-209	ENST00000560559	CYP17A1	P05093	508 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	HK1	P19367	917 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	KIR2DL3	P43628	341 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	SPIDR	Q14159	915 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	ZNF174	Q15697	407 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	TKFC	Q3LXA3	575 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	LONRF3	Q496Y0	759 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	TIGD2	Q4W5G0	525 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	DALRD3	Q5D0E6	543 aa	Known RBP	5.21	□□□□□ -1.58
BLM-209	ENST00000560559	CT47A1	Q5JQC4	288 aa	Predicted RBP	5.21	□□□□□ -1.58
BLM-209	ENST00000560559	LRRC55	Q6ZSA7	311 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	RHOU	Q7L0Q8	258 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	NME9	Q86XW9	330 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	TCP11L2	Q8N4U5	519 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	MFSD3	Q96ES6	412 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	SNX27	Q96L92	541 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	UIMC1	Q96RL1	719 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	SAMD15	Q9P1V8	674 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	MEGF6	O75095	1541 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	UNC80	Q8N2C7	3258 aa		5.21	□□□□□ -1.58
BLM-209	ENST00000560559	PARP4	Q9UKK3	1724 aa	Known RBP	5.2	□□□□□ -1.58
BLM-209	ENST00000560559	SBNO1	A3KN83	1393 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559		B4E1Z4	1266 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559	B3GALT2	O43825	422 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559	LETM1	O95202	739 aa	Predicted RBP	5.2	□□□□□ -1.58
BLM-209	ENST00000560559	ASMTL	O95671	621 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559	KRT18	P05783	430 aa	Known RBP	5.2	□□□□□ -1.58
BLM-209	ENST00000560559	MAP2K1	Q02750	393 aa	Predicted RBP	5.2	□□□□□ -1.58
BLM-209	ENST00000560559	BRDT	Q58F21	947 aa	Predicted RBP	5.2	□□□□□ -1.58
BLM-209	ENST00000560559	DCAF17	Q5H9S7	520 aa	Predicted RBP	5.2	□□□□□ -1.58
BLM-209	ENST00000560559	C1QL3	Q5VWW1	255 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559	CHST14	Q8NCH0	376 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559	CAAP1	Q9H8G2	361 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559	CYP4F11	Q9HBI6	524 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559	CABP5	Q9NP86	173 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559	EIF2B4	Q9UI10	523 aa	Known RBP	5.2	□□□□□ -1.58
BLM-209	ENST00000560559	THRAP3	Q9Y2W1	955 aa	Known RBP	5.2	□□□□□ -1.58
BLM-209	ENST00000560559	PTCH2	Q9Y6C5	1203 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559	KIF1A	Q12756	1690 aa		5.2	□□□□□ -1.58
BLM-209	ENST00000560559	PTPDC1	A2A3K4	754 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	ZAR1L	A6NP61	321 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	DVL2	O14641	736 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	APOL3	O95236	402 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	GYPE	P15421	78 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	GNAL	P38405	381 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	IL12RB1	P42701	662 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	TNNT2	P45379	298 aa	Predicted RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	CDKN1C	P49918	316 aa	Predicted RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	NFE2	Q16621	373 aa	Predicted RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	MAN2A1	Q16706	1144 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	STRIP1	Q5VSL9	837 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	NAIF1	Q69YI7	327 aa	Predicted RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	TIGD7	Q6NT04	549 aa	Predicted RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	WDR75	Q8IWA0	830 aa	Known RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	SAMD3	Q8N6K7	520 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	OTUD6B	Q8N6M0	293 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	KIAA1958	Q8N8K9	716 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	PNISR	Q8TF01	805 aa	Known RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	NINJ1	Q92982	152 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	GTPBP4	Q9BZE4	634 aa	Known RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	LAS1L	Q9Y4W2	734 aa	Known RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	TNPO3	Q9Y5L0	923 aa	Known RBP	5.19	□□□□□ -1.58
BLM-209	ENST00000560559	HFM1	A2PYH4	1435 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	SSH2	Q76I76	1423 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	QSER1	Q2KHR3	1735 aa		5.19	□□□□□ -1.58
BLM-209	ENST00000560559	VIRMA	Q69YN4	1812 aa	Known RBP	5.18	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms