RNA–Protein interactions for RNA: ENST00000560491.2

LYSMD2-204, Transcript of LysM domain containing 2, humanhuman

TSL 3 BASIC

Gene LYSMD2, Length 1,026 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-204ENST00000560491 CYP24A1Q07973 514 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 CCDC85BQ15834 202 aaPredicted RBP16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 SPATA1Q5VX52 437 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 CEP135Q66GS9 1140 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 LMBRD2Q68DH5 695 aaPredicted RBP16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 FUT10Q6P4F1 479 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 CD300LGQ6UXG3 332 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 TAS1R1Q7RTX1 841 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 TRIML1Q8N9V2 468 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 BEST2Q8NFU1 509 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 MICAL1Q8TDZ2 1067 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 AUTS2Q8WXX7 1259 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 PPM1EQ8WY54 764 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 EEF2KMTQ96G04 330 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 B3GALT6Q96L58 329 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 GTPBP4Q9BZE4 634 aaKnown RBP16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 GPR62Q9BZJ7 368 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 ZBP1Q9H171 429 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 LMCD1Q9NZU5 365 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 CTNND2Q9UQB3 1225 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 STXBP5LQ9Y2K9 1186 aa16.81■□□□□ 0.28
LYSMD2-204ENST00000560491 TMEM189-UBE2V1I3L0A0 370 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 I3L4J1 428 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 PPEF2O14830 753 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 XPOTO43592 962 aaKnown RBP16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 EFEMP2O95967 443 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 LRPAP1P30533 357 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 CA8P35219 290 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 BRCC3P46736 316 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 TFAMQ00059 246 aaKnown RBP16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 STIM1Q13586 685 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 NFIL3Q16649 462 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 TIGD5Q53EQ6 642 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 ANKRD40Q6AI12 368 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 CENPPQ6IPU0 288 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 DCLRE1AQ6PJP8 1040 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 TMC7Q7Z402 723 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 ADGRD2Q7Z7M1 963 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 RNF168Q8IYW5 571 aaPredicted RBP16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 TMEM174Q8WUU8 243 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 CCDC127Q96BQ5 260 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 DDX27Q96GQ7 796 aaKnown RBP16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 TSPAN18Q96SJ8 248 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 HERC2P3Q9BVR0 1158 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 GZF1Q9H116 711 aaPredicted RBP16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 SCN1AP35498 2009 aa16.8■□□□□ 0.28
LYSMD2-204ENST00000560491 SF3B1O75533 1304 aaKnown RBP eCLIP16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 HIDE1A8MVS5 230 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 PSMA7O14818 248 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 SOD2P04179 222 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 DLATP10515 647 aaKnown RBP16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 CCNE1P24864 410 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 RPL9P32969 192 aaKnown RBP16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 MYBPC2Q14324 1141 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 PSMD6Q15008 389 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 EDRF1Q3B7T1 1238 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 TCEAL5Q5H9L2 206 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 SCARA3Q6AZY7 606 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 OR5B17Q8NGF7 314 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 MAFAQ8NHW3 353 aaPredicted RBP16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 PLEKHO2Q8TD55 490 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 NELFBQ8WX92 580 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 DHTKD1Q96HY7 919 aaPredicted RBP16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 MFSD14AQ96MC6 490 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 POP1Q99575 1024 aaKnown RBP16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 TSG101Q99816 390 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 MTMR12Q9C0I1 747 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 NSUN3Q9H649 340 aaKnown RBP16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 DPP3Q9NY33 737 aa16.79■□□□□ 0.28
LYSMD2-204ENST00000560491 COL6A3P12111 3177 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 TSC2P49815 1807 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 C2CD2LO14523 706 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 AKAP3O75969 853 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 CTSAP10619 480 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 RPL13P26373 211 aaKnown RBP16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 PPP1R2P41236 205 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 STX17P56962 302 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 ADAM9Q13443 819 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 SMC1AQ14683 1233 aaKnown RBP16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 SURF1Q15526 300 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 FAM171A1Q5VUB5 890 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 C9orf57Q5W0N0 161 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 NT5DC4Q86YG4 428 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 FNBP1Q96RU3 617 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 FRMD4BQ9Y2L6 1034 aa16.78■□□□□ 0.28
LYSMD2-204ENST00000560491 CXCL14O95715 111 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 URODP06132 367 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 TMEM191BP0C7N4 346 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 POLR2BP30876 1174 aaKnown RBP16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 GTF2F1P35269 517 aaKnown RBP eCLIP16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 GLUD2P49448 558 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 LRRC63Q05C16 580 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 PAK1Q13153 545 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 PTPN14Q15678 1187 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 DPCR1Q3MIW9 517 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 RTP2Q5QGT7 225 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 CCDC183Q5T5S1 534 aa16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 RBM43Q6ZSC3 357 aaKnown RBP16.77■□□□□ 0.28
LYSMD2-204ENST00000560491 RBM23Q86U06 439 aaKnown RBP16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms