RNA–Protein interactions for RNA: ENST00000560353.1

APH1B-208, Transcript of aph-1 homolog B, gamma-secretase subunit, humanhuman

TSL 3

Gene APH1B, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1B-208ENST00000560353 TUSC3Q13454 348 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 CCINQ13939 588 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.44□□□□□ -0.58
APH1B-208ENST00000560353 SYNE3Q6ZMZ3 975 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 ANO5Q75V66 913 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 PDZD4Q76G19 769 aaPredicted RBP11.44□□□□□ -0.58
APH1B-208ENST00000560353 MIER3Q7Z3K6 550 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 REXO1Q8N1G1 1221 aaKnown RBP11.44□□□□□ -0.58
APH1B-208ENST00000560353 GLIS3Q8NEA6 775 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 EXOC6Q8TAG9 804 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 HASPINQ8TF76 798 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 TCEAL4Q96EI5 215 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 ZSWIM3Q96MP5 696 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 PAAF1Q9BRP4 392 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 KRTAP3-2Q9BYR7 98 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 DUSP15Q9H1R2 295 aaPredicted RBP11.44□□□□□ -0.58
APH1B-208ENST00000560353 SLC32A1Q9H598 525 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 RBM28Q9NW13 759 aaKnown RBP11.44□□□□□ -0.58
APH1B-208ENST00000560353 MTRRQ9UBK8 725 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 CDY1Q9Y6F8 540 aa11.44□□□□□ -0.58
APH1B-208ENST00000560353 ADAMTS20P59510 1910 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 FAM221BA6H8Z2 402 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 SPECC1L-ADORA2AF8WAN1 911 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 NRG2O14511 850 aaPredicted RBP11.43□□□□□ -0.58
APH1B-208ENST00000560353 KHNYNO15037 678 aaKnown RBP11.43□□□□□ -0.58
APH1B-208ENST00000560353 ATG13O75143 517 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 CAPNS1P04632 268 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 ELF1P32519 619 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 CTHP32929 405 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 RDXP35241 583 aaKnown RBP11.43□□□□□ -0.58
APH1B-208ENST00000560353 FGD1P98174 961 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 FUT2Q10981 343 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 COL28A1Q2UY09 1125 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 WDR44Q5JSH3 913 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 MICU3Q86XE3 530 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 CAMKK1Q8N5S9 505 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 RNF149Q8NC42 400 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 DEFB124Q8NES8 71 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 ZSCAN18Q8TBC5 510 aaPredicted RBP11.43□□□□□ -0.58
APH1B-208ENST00000560353 RUFY2Q8WXA3 655 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 TMEM143Q96AN5 459 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 CPB2Q96IY4 423 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 NXF3Q9H4D5 531 aaKnown RBP11.43□□□□□ -0.58
APH1B-208ENST00000560353 C6orf50Q9HD87 102 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 KLK14Q9P0G3 267 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 CACNG4Q9UBN1 327 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 SLC8A2Q9UPR5 921 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 PPME1Q9Y570 386 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 BACE2Q9Y5Z0 518 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 COL4A2P08572 1712 aa11.43□□□□□ -0.58
APH1B-208ENST00000560353 CASTOR2A6NHX0 329 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 HEPACAM2A8MVW5 462 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 H0Y626 953 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 DPYSL4O14531 572 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 TRIM16O95361 564 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 FGFR3P22607 806 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 RFC5P40937 340 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 CCR2P41597 374 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 SOX9P48436 509 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 PSMC5P62195 406 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 LSM11P83369 360 aaKnown RBP eCLIP11.42□□□□□ -0.58
APH1B-208ENST00000560353 PLA2G4FQ68DD2 849 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 IQCEQ6IPM2 695 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 TXNDC11Q6PKC3 985 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 ZNF461Q8TAF7 563 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 TCP11Q8WWU5 503 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 CCDC136Q96JN2 1154 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 MKNK1Q9BUB5 465 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 GPR88Q9GZN0 384 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 ZMYND12Q9H0C1 365 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 DHX33Q9H6R0 707 aaKnown RBP11.42□□□□□ -0.58
APH1B-208ENST00000560353 PARP2Q9UGN5 583 aa11.42□□□□□ -0.58
APH1B-208ENST00000560353 SPAG17Q6Q759 2223 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 TICRRQ7Z2Z1 1910 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 ESYT2A0FGR8 921 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 INO80B-WBP1J3KQ70 363 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 CDX4O14627 284 aaPredicted RBP11.41□□□□□ -0.58
APH1B-208ENST00000560353 PSMD10O75832 226 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 USP11P51784 963 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 PTENP60484 403 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 FCHO2Q0JRZ9 810 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 KARSQ15046 597 aaKnown RBP11.41□□□□□ -0.58
APH1B-208ENST00000560353 PON2Q15165 354 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 UAP1L1Q3KQV9 507 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 SLC27A1Q6PCB7 646 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 ANKS3Q6ZW76 656 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 FERMT3Q86UX7 667 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 SGMS1Q86VZ5 419 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 CHD1LQ86WJ1 897 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 SPNS2Q8IVW8 549 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 TCEAL8Q8IYN2 117 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 ELMOD1Q8N336 334 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 LEMD2Q8NC56 503 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 ADAM32Q8TC27 787 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 CCDC12Q8WUD4 166 aaPredicted RBP11.41□□□□□ -0.58
APH1B-208ENST00000560353 CEP170P1Q96L14 293 aa11.41□□□□□ -0.58
APH1B-208ENST00000560353 ZNF512Q96ME7 567 aaPredicted RBP11.41□□□□□ -0.58
APH1B-208ENST00000560353 BBC3Q96PG8 261 aaPredicted RBP11.41□□□□□ -0.58
APH1B-208ENST00000560353 CACNA2D2Q9NY47 1150 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms