RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 CREBRFQ8IUR6 639 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 EFCAB13Q8IY85 973 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 C18orf25Q96B23 403 aaPredicted RBP13.26□□□□□ -0.29
USP8-209ENST00000560297 TIFAQ96CG3 184 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 POP1Q99575 1024 aaKnown RBP13.26□□□□□ -0.29
USP8-209ENST00000560297 SAMSN1Q9NSI8 373 aaKnown RBP13.26□□□□□ -0.29
USP8-209ENST00000560297 FANCLQ9NW38 375 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 SPG21Q9NZD8 308 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 STK39Q9UEW8 545 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 ITGA11Q9UKX5 1188 aa13.26□□□□□ -0.29
USP8-209ENST00000560297 NRP1O14786 923 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 EEF1GP26641 437 aaKnown RBP13.25□□□□□ -0.29
USP8-209ENST00000560297 SLC11A1P49279 550 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 ERVK-21P61565 698 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 TPM4P67936 248 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 DLG4P78352 724 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 RBP5P82980 135 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 TAP1Q03518 808 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 KRT17Q04695 432 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 SOX4Q06945 474 aaPredicted RBP13.25□□□□□ -0.29
USP8-209ENST00000560297 NCAPHQ15003 741 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 IQCB1Q15051 598 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 UPP1Q16831 310 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 TCERG1LQ5VWI1 586 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 PPP2R2DQ66LE6 453 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 TRAPPC11Q7Z392 1133 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 TRIM59Q8IWR1 403 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 DHX40Q8IX18 779 aaKnown RBP13.25□□□□□ -0.29
USP8-209ENST00000560297 AOPEPQ8N6M6 819 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 COLGALT1Q8NBJ5 622 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 ANKRD20A12PQ8NF67 263 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 OR5B17Q8NGF7 314 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 FAM200AQ8TCP9 573 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 PLEKHO2Q8TD55 490 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 ZNF516Q92618 1163 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 CNOT6LQ96LI5 555 aaKnown RBP13.25□□□□□ -0.29
USP8-209ENST00000560297 NKX2-4Q9H2Z4 354 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 CBX8Q9HC52 389 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 DNAJB4Q9UDY4 337 aa13.25□□□□□ -0.29
USP8-209ENST00000560297 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.25□□□□□ -0.29
USP8-209ENST00000560297 TMEM265A0A087WTH1 108 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 ANO9A1A5B4 782 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 CASTOR2A6NHX0 329 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 KCNJ18B7U540 433 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 C5orf67F2Z3F1 127 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 TMEM189-UBE2V1I3L0A0 370 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 PODXLO00592 558 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 PIRO00625 290 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 PMM2O15305 246 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 TRAPPC3O43617 180 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 PHACTR2O75167 634 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 TADA2AO75478 443 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 B3GAT3O94766 335 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 C4BPAP04003 597 aaKnown RBP13.24□□□□□ -0.29
USP8-209ENST00000560297 TPM2P07951 284 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 LINC00271P0C7V0 271 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 CDK11BP21127 795 aaKnown RBP13.24□□□□□ -0.29
USP8-209ENST00000560297 PNPLA4P41247 253 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 MTIF2P46199 727 aaKnown RBP13.24□□□□□ -0.29
USP8-209ENST00000560297 CLCNKBP51801 687 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 KCNJ12Q14500 433 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 TCP11X2Q5H9J9 407 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 DCAF17Q5H9S7 520 aaPredicted RBP13.24□□□□□ -0.29
USP8-209ENST00000560297 C1orf220Q5T0J3 134 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 CDKAL1Q5VV42 579 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 C9orf57Q5W0N0 161 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 LMBRD2Q68DH5 695 aaPredicted RBP13.24□□□□□ -0.29
USP8-209ENST00000560297 SV2AQ7L0J3 742 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 C1orf127Q8N9H9 656 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 SLC35C1Q96A29 364 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 MTMR12Q9C0I1 747 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 TMEM8AQ9HCN3 771 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 TUBGCP4Q9UGJ1 667 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 PUF60Q9UHX1 559 aaKnown RBP13.24□□□□□ -0.29
USP8-209ENST00000560297 COL4A6Q14031 1691 aa13.24□□□□□ -0.29
USP8-209ENST00000560297 PTPRJQ12913 1337 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 LRRC10BA6NIK2 292 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 GOLGA6L19H0YKK7 550 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 P4HA2O15460 535 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 B4GALT3O60512 393 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 N4BP1O75113 896 aaKnown RBP13.23□□□□□ -0.29
USP8-209ENST00000560297 ITGB3P05106 788 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 TRIM49P0CI25 452 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 TRIM49CP0CI26 452 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 ZNF18P17022 549 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 ATICP31939 592 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 CTNNB1P35222 781 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 GCLMP48507 274 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 PLCB3Q01970 1234 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 PPP3CAQ08209 521 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 CETN1Q12798 172 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 KCNH2Q12809 1159 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 ELAVL2Q12926 359 aaKnown RBP13.23□□□□□ -0.29
USP8-209ENST00000560297 MYO1EQ12965 1108 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 BIRC3Q13489 604 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 TRPC3Q13507 836 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 ZACNQ401N2 412 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 EPC2Q52LR7 807 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 KRT39Q6A163 491 aa13.23□□□□□ -0.29
USP8-209ENST00000560297 C15orf39Q6ZRI6 1047 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms