RNA–Protein interactions for RNA: ENST00000560070.5

USP3-217, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-217ENST00000560070 ARPP19P56211 112 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 MRPS5P82675 430 aaKnown RBP9.28□□□□□ -0.92
USP3-217ENST00000560070 TMEM132DQ14C87 1099 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 PTPN14Q15678 1187 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 ZBTB6Q15916 424 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 DUSP6Q16828 381 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 USP41Q3LFD5 358 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 RTP2Q5QGT7 225 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 KIAA0319Q5VV43 1072 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 DSTYKQ6XUX3 929 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 HS2ST1Q7LGA3 356 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 CD302Q8IX05 232 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 GPD1LQ8N335 351 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 C12orf76Q8N812 135 aaPredicted RBP9.28□□□□□ -0.92
USP3-217ENST00000560070 VN1R2Q8NFZ6 395 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 CCDC127Q96BQ5 260 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 UROC1Q96N76 676 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 POP1Q99575 1024 aaKnown RBP9.28□□□□□ -0.92
USP3-217ENST00000560070 TTPALQ9BTX7 342 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 HERC2P3Q9BVR0 1158 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 EMILIN2Q9BXX0 1053 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 DPP3Q9NY33 737 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 THEGQ9P2T0 379 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 HOOK1Q9UJC3 728 aaKnown RBP9.28□□□□□ -0.92
USP3-217ENST00000560070 UBQLN1Q9UMX0 589 aaKnown RBP9.28□□□□□ -0.92
USP3-217ENST00000560070 COG5Q9UP83 839 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 COL4A6Q14031 1691 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 SZT2Q5T011 3432 aa9.28□□□□□ -0.92
USP3-217ENST00000560070 EVPLQ92817 2033 aa9.27□□□□□ -0.92
USP3-217ENST00000560070 MYH9P35579 1960 aaKnown RBP9.27□□□□□ -0.93
USP3-217ENST00000560070 TEX28O15482 410 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 XPOTO43592 962 aaKnown RBP9.27□□□□□ -0.93
USP3-217ENST00000560070 TRAPPC3O43617 180 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 NCK2O43639 380 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 LILRB3O75022 631 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 IL18RAPO95256 599 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 ADRB2P07550 413 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 KRT19P08727 400 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 DLATP10515 647 aaKnown RBP9.27□□□□□ -0.93
USP3-217ENST00000560070 MCM4P33991 863 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 LTBRP36941 435 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 DSG1Q02413 1049 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 KCNB1Q14721 858 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 SPATA1Q5VX52 437 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 CEP135Q66GS9 1140 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 EFCAB13Q8IY85 973 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 CSGALNACT2Q8N6G5 542 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 EFHBQ8N7U6 833 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 XXYLT1Q8NBI6 393 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.27□□□□□ -0.93
USP3-217ENST00000560070 PABPC5Q96DU9 382 aaKnown RBP9.27□□□□□ -0.93
USP3-217ENST00000560070 EEF2KMTQ96G04 330 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 TIGD1Q96MW7 591 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 ASB2Q96Q27 587 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 KCTD10Q9H3F6 313 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 ASB7Q9H672 318 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 CHST7Q9NS84 486 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 CLEC1BQ9P126 229 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 MAN1B1Q9UKM7 699 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 AGAP1Q9UPQ3 857 aa9.27□□□□□ -0.93
USP3-217ENST00000560070 SF3B1O75533 1304 aaKnown RBP eCLIP9.27□□□□□ -0.931e-6■■■■■ 175.4
USP3-217ENST00000560070 SIP14410 1827 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 SPTLC1O15269 473 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 ADAM12O43184 909 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 CALUO43852 315 aaPredicted RBP9.26□□□□□ -0.93
USP3-217ENST00000560070 KIF20AO95235 890 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 GLP2RO95838 553 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 NR3C1P04150 777 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 WEE2P0C1S8 567 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 TNNI1P19237 187 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 CYP3A5P20815 502 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 PRCPP42785 496 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 CASP4P49662 377 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 BMT2Q1RMZ1 405 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 C9orf57Q5W0N0 161 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 BRSK2Q8IWQ3 736 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 OR5B17Q8NGF7 314 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 LNX1Q8TBB1 728 aaPredicted RBP9.26□□□□□ -0.93
USP3-217ENST00000560070 SLC22A17Q8WUG5 538 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 CACTINQ8WUQ7 758 aaKnown RBP9.26□□□□□ -0.93
USP3-217ENST00000560070 ATXN2LQ8WWM7 1075 aaKnown RBP9.26□□□□□ -0.93
USP3-217ENST00000560070 GSDMAQ96QA5 445 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 FNBP1Q96RU3 617 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 CDCA3Q99618 268 aaPredicted RBP9.26□□□□□ -0.93
USP3-217ENST00000560070 KIAA1586Q9HCI6 787 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 LMBRD1Q9NUN5 540 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 RMND1Q9NWS8 449 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 STK39Q9UEW8 545 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 SSX2IPQ9Y2D8 614 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 DERAQ9Y315 318 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 HCFC2Q9Y5Z7 792 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 TTC3P53804 2025 aa9.26□□□□□ -0.93
USP3-217ENST00000560070 PDXKO00764 312 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 TBX10O75333 385 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 CLSTN1O94985 981 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 EFEMP2O95967 443 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 CST3P01034 146 aaPredicted RBP9.25□□□□□ -0.93
USP3-217ENST00000560070 TNNC2P02585 160 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 ITGB3P05106 788 aa9.25□□□□□ -0.93
USP3-217ENST00000560070 TMEM191BP0C7N4 346 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms