RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CDCA2Q69YH5 1023 aaPredicted RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 TTI2Q6NXR4 508 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 ZNF720Q7Z2F6 126 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 HAUS6Q7Z4H7 955 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 SERINC5Q86VE9 423 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 MYOCDQ8IZQ8 938 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 SLC43A3Q8NBI5 491 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 ARRDC4Q8NCT1 418 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 STK32AQ8WU08 396 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 KIFAP3Q92845 792 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 SAAL1Q96ER3 474 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 CCDC34Q96HJ3 373 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 PAWRQ96IZ0 340 aaKnown RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 ZBTB45Q96K62 511 aaPredicted RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 GLT1D1Q96MS3 346 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 CBWD1Q9BRT8 395 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 MKNK1Q9BUB5 465 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 TARS2Q9BW92 718 aaKnown RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 STRA6Q9BX79 667 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 INO80BQ9C086 356 aaPredicted RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 HAPLN2Q9GZV7 340 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 CCDC113Q9H0I3 377 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 HSD3B7Q9H2F3 369 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 KCTD10Q9H3F6 313 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 PCIF1Q9H4Z3 704 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 IFT122Q9HBG6 1241 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 OLFML3Q9NRN5 406 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 SAMSN1Q9NSI8 373 aaKnown RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 RNF19AQ9NV58 838 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 ANO10Q9NW15 660 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 KCND2Q9NZV8 630 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 ARHGAP28Q9P2N2 729 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 ZMIZ1Q9ULJ6 1067 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 TBX20Q9UMR3 447 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 ATP11BQ9Y2G3 1177 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 CDY2AQ9Y6F7 541 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 KIAA0100Q14667 2235 aaKnown RBP5.72□□□□□ -1.49
SPG11-220ENST00000559933 PHLPP2Q6ZVD8 1323 aa5.72□□□□□ -1.49
SPG11-220ENST00000559933 TANC1Q9C0D5 1861 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 SCN5AQ14524 2016 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 SMIM35A0A1B0GVV1 85 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 C9orf172C9J069 976 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 PSMA7O14818 248 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 MAGEB2O15479 319 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 KPNA6O60684 536 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 CABYRO75952 493 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 CHRNA1P02708 482 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 GHRP10912 638 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 COL6A1P12109 1028 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 TARSP26639 723 aaKnown RBP5.71□□□□□ -1.5
SPG11-220ENST00000559933 ADSSP30520 456 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 CASP4P49662 377 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 ZNF165P49910 485 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 CYP2J2P51589 502 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 RTP1P59025 263 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 MYL5Q02045 173 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 MLLT1Q03111 559 aaPredicted RBP5.71□□□□□ -1.5
SPG11-220ENST00000559933 DOC2BQ14184 412 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 MBTPS1Q14703 1052 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 ZNF618Q5T7W0 954 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 EEF1DP3Q658K8 133 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 SLC39A5Q6ZMH5 540 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 LRRC55Q6ZSA7 311 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 SESTD1Q86VW0 696 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 MAP4K3Q8IVH8 894 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 FAM126BQ8IXS8 530 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 TMEM192Q8IY95 271 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 GUF1Q8N442 669 aaKnown RBP5.71□□□□□ -1.5
SPG11-220ENST00000559933 CEP120Q8N960 986 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 TRIML1Q8N9V2 468 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 MLKLQ8NB16 471 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 RETREG2Q8NC44 543 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 P2RX5Q93086 422 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 CCDC47Q96A33 483 aaKnown RBP5.71□□□□□ -1.5
SPG11-220ENST00000559933 COL26A1Q96A83 441 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 BICD1Q96G01 975 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 SCLYQ96I15 445 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 IFT74Q96LB3 600 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 ACCSQ96QU6 501 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 MAP7D2Q96T17 732 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 TIPINQ9BVW5 301 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 CXCL16Q9H2A7 254 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 C11orf49Q9H6J7 331 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 AGPAT3Q9NRZ7 376 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 FANCLQ9NW38 375 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 CXXC1Q9P0U4 656 aaPredicted RBP5.71□□□□□ -1.5
SPG11-220ENST00000559933 LARSQ9P2J5 1176 aaKnown RBP5.71□□□□□ -1.5
SPG11-220ENST00000559933 ANKFY1Q9P2R3 1169 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 LRFN2Q9ULH4 789 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 NOC2LQ9Y3T9 749 aaKnown RBP5.71□□□□□ -1.5
SPG11-220ENST00000559933 NFE2L3Q9Y4A8 694 aa5.71□□□□□ -1.5
SPG11-220ENST00000559933 A0A0A0MRY4 1105 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 FSD2A1L4K1 749 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 DLL1O00548 723 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 ABLIM1O14639 778 aa5.7□□□□□ -1.5
SPG11-220ENST00000559933 HNRNPDLO14979 420 aaKnown RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 EIF3DO15371 548 aaKnown RBP eCLIP5.7□□□□□ -1.5
SPG11-220ENST00000559933 MEFVO15553 781 aaPredicted RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 GAS2O43903 313 aaKnown RBP5.7□□□□□ -1.5
SPG11-220ENST00000559933 MGEA5O60502 916 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms