RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 SPEM1Q8N4L4 309 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 TTC8Q8TAM2 541 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 FAM200AQ8TCP9 573 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 DEPDC1BQ8WUY9 529 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 SMARCD2Q92925 531 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 NOTCH4Q99466 2003 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 EIF2AK1Q9BQI3 630 aaKnown RBP11.9□□□□□ -0.5
TRAF3-207ENST00000559734 SLITRK6Q9H5Y7 841 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 GOLGA2P5Q9HBQ8 144 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 AVENQ9NQS1 362 aaPredicted RBP11.9□□□□□ -0.5
TRAF3-207ENST00000559734 RXFP3Q9NSD7 469 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 USP24Q9UPU5 2620 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 USP20Q9Y2K6 914 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 BACE2Q9Y5Z0 518 aa11.9□□□□□ -0.5
TRAF3-207ENST00000559734 ARHGEF37A1IGU5 675 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 TTLL13PA6NNM8 815 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 K7ESF4 209 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 TRAPPC3O43617 180 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 SLITRK3O94933 977 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 BAG4O95429 457 aaKnown RBP11.89□□□□□ -0.51
TRAF3-207ENST00000559734 PROS1P07225 676 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 HOXB3P14651 431 aaPredicted RBP11.89□□□□□ -0.51
TRAF3-207ENST00000559734 HOXC13P31276 330 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 RARRES1P49788 294 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 PTGDRQ13258 359 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 PRPF4BQ13523 1007 aaKnown RBP11.89□□□□□ -0.51
TRAF3-207ENST00000559734 NAB2Q15742 525 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 NPY5RQ15761 445 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 IQCEQ6IPM2 695 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 GALNT17Q6IS24 598 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 ZSCAN18Q8TBC5 510 aaPredicted RBP11.89□□□□□ -0.51
TRAF3-207ENST00000559734 PIGOQ8TEQ8 1089 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 PRIMPOLQ96LW4 560 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 ANKEF1Q9NU02 776 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 INSL5Q9Y5Q6 135 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 SNX14Q9Y5W7 946 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 VWA8A3KMH1 1905 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 TICRRQ7Z2Z1 1910 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 CHD8Q9HCK8 2581 aa11.89□□□□□ -0.51
TRAF3-207ENST00000559734 NCANO14594 1321 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 CFAP47Q6ZTR5 3102 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 HEPACAM2A8MVW5 462 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 C1QTNF9BB2RNN3 333 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 TMEM189-UBE2V1I3L0A0 370 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 SEC24AO95486 1093 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 C1QTNF9P0C862 333 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 LIMK1P53667 647 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 SHC2P98077 582 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 STK3Q13188 491 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 TEAD2Q15562 447 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 MAPK6Q16659 721 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 STPG1Q5TH74 334 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 PSAPL1Q6NUJ1 521 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 SKAP1Q86WV1 359 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 GPIHBP1Q8IV16 184 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 SLFN12Q8IYM2 578 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 C3orf58Q8NDZ4 430 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 ZNF461Q8TAF7 563 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 ZNF512Q96ME7 567 aaPredicted RBP11.88□□□□□ -0.51
TRAF3-207ENST00000559734 NAP1L4Q99733 375 aaKnown RBP11.88□□□□□ -0.51
TRAF3-207ENST00000559734 LARP6Q9BRS8 491 aaKnown RBP11.88□□□□□ -0.51
TRAF3-207ENST00000559734 SMOC1Q9H4F8 434 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 TRPV5Q9NQA5 729 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 ASAH2Q9NR71 780 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 C2orf42Q9NWW7 574 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 ZMIZ1Q9ULJ6 1067 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 COL4A2P08572 1712 aa11.88□□□□□ -0.51
TRAF3-207ENST00000559734 CDC45O75419 566 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 KCNK5O95279 499 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 CCDC192P0DO97 292 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 PXNP49023 591 aaPredicted RBP11.87□□□□□ -0.51
TRAF3-207ENST00000559734 TWF1Q12792 350 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 EEF1DP3Q658K8 133 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 SLC8B1Q6J4K2 584 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 CPLX2Q6PUV4 134 aaKnown RBP11.87□□□□□ -0.51
TRAF3-207ENST00000559734 UNQ6494/PRO21346Q6UXR6 183 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 WDR5BQ86VZ2 330 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 MFSD6LQ8IWD5 586 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 UROC1Q96N76 676 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 AGXT2Q9BYV1 514 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 C2orf40Q9H1Z8 148 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 FZD8Q9H461 694 aa11.87□□□□□ -0.51
TRAF3-207ENST00000559734 SPECC1L-ADORA2AF8WAN1 911 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 MOSPD3O75425 235 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 RPP40O75818 363 aaKnown RBP11.86□□□□□ -0.51
TRAF3-207ENST00000559734 MICAL2O94851 1124 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 ABLIM3O94929 683 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 EDN1P05305 212 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 ZNF806P0C7X5 589 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 ATF2P15336 505 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 ATP2B1P20020 1258 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 PSMA5P28066 241 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 RBM25P49756 843 aaKnown RBP11.86□□□□□ -0.51
TRAF3-207ENST00000559734 FOXC1Q12948 553 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 ACAP1Q15027 740 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 PON2Q15165 354 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 UPP1Q16831 310 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 FAM187BQ17R55 369 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 DCAF4L1Q3SXM0 396 aa11.86□□□□□ -0.51
TRAF3-207ENST00000559734 CTXN3Q4LDR2 81 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms