RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 ITGB3P05106 788 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 ATF7P17544 494 aaPredicted RBP18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 NOP14P78316 857 aaKnown RBP18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 TLE2Q04725 743 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 HSP90AA2PQ14568 343 aaPredicted RBP18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 SCLYQ96I15 445 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 NT5C1BQ96P26 610 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 XYLT2Q9H1B5 865 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 ASB7Q9H672 318 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 FAM170AA1A519 330 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 FOXN3O00409 490 aaPredicted RBP18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 SELPP16109 830 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 SURF1Q15526 300 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 CYP26C1Q6V0L0 522 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 ANKRD33Q7Z3H0 272 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 IRF2BP2Q7Z5L9 587 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 OLIG1Q8TAK6 271 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 CAGE1Q8TC20 777 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 ANKRD36BP1Q96IX9 119 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 ADAM2Q99965 735 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 STK33Q9BYT3 514 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 IFIH1Q9BYX4 1025 aaKnown RBP18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 PPP1R12CQ9BZL4 782 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 MCOLN1Q9GZU1 580 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 WNT8AQ9H1J5 351 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 NHEJ1Q9H9Q4 299 aaPredicted RBP18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 GOLGA2P5Q9HBQ8 144 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 SPTLC3Q9NUV7 552 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 TRMT1Q9NXH9 659 aaKnown RBP18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 CNTN3Q9P232 1028 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 CACNG4Q9UBN1 327 aa18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 REXO2Q9Y3B8 237 aaKnown RBP18.67■□□□□ 0.58
CHRNA3-206ENST00000559658 CLSTN1O94985 981 aa18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 TNNC2P02585 160 aa18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 KRT19P08727 400 aa18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 MSNP26038 577 aaKnown RBP18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 SOX4Q06945 474 aaPredicted RBP18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 ASIC2Q16515 512 aa18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 KYAT1Q16773 422 aa18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 LRRC26Q2I0M4 334 aa18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 RTN4RL1Q86UN2 441 aaPredicted RBP18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 RRAGDQ9NQL2 400 aaPredicted RBP18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 AIPL1Q9NZN9 384 aa18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 TFR2Q9UP52 801 aa18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 ATP11BQ9Y2G3 1177 aa18.66■□□□□ 0.58
CHRNA3-206ENST00000559658 PTGESO14684 152 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 ZNF263O14978 683 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 ASS1P00966 412 aaKnown RBP18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 POLR2BP30876 1174 aaKnown RBP18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 SOX5P35711 763 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 EIF4A3P38919 411 aaKnown RBP18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 MLH1P40692 756 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 YARSP54577 528 aaKnown RBP18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 AGMOQ6ZNB7 445 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 APBB1IPQ7Z5R6 666 aaPredicted RBP18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 TMTC1Q8IUR5 882 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 CHST12Q9NRB3 414 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 C1orf112Q9NSG2 853 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 POLIQ9UNA4 740 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 C2CD2Q9Y426 696 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 SMIM28A0A1B0GU29 152 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 EVI5O60447 810 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 AP3M2P53677 418 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 CCL23P55773 120 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 POU5F1Q01860 360 aaKnown RBP18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 TDRD12Q587J7 1177 aaKnown RBP18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 SCARA5Q6ZMJ2 495 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 RNF169Q8NCN4 708 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 GSTCDQ8NEC7 633 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 HAUS4Q9H6D7 363 aa18.65■□□□□ 0.58
CHRNA3-206ENST00000559658 ZSCAN20P17040 1043 aaPredicted RBP18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 IGFBP6P24592 240 aaPredicted RBP18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 CYP2C18P33260 490 aa18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 PTK2Q05397 1052 aa18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 ZBTB6Q15916 424 aa18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 TSR1Q2NL82 804 aaKnown RBP18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 ZNF571Q7Z3V5 609 aaPredicted RBP18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 DNAAF5Q86Y56 855 aa18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 CCAR2Q8N163 923 aaKnown RBP18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 SHC3Q92529 594 aa18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 SYN2Q92777 582 aaPredicted RBP18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 GAD1Q99259 594 aa18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 HIPK3Q9H422 1215 aa18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 PLEKHA5Q9HAU0 1116 aa18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 ZNHIT6Q9NWK9 470 aaKnown RBP18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 MIOSQ9NXC5 875 aa18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 DPP3Q9NY33 737 aa18.64■□□□□ 0.57
CHRNA3-206ENST00000559658 ZC3H11AO75152 810 aaKnown RBP eCLIP18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 USP8P40818 1118 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 STAT1P42224 750 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 CDK17Q00537 523 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 CYP27A1Q02318 531 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 TRPC3Q13507 836 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 BFSP2Q13515 415 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 ASTE1Q2TB18 679 aaPredicted RBP18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 ZNF699Q32M78 642 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 XKR4Q5GH76 650 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 C11orf49Q9H6J7 331 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 PPP2R2CQ9Y2T4 447 aa18.63■□□□□ 0.57
CHRNA3-206ENST00000559658 ADGRG1Q9Y653 693 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms