RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 PSMC5P62195 406 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 IRX4P78413 519 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 PLCB2Q00722 1185 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 FCHO2Q0JRZ9 810 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 HNRNPDQ14103 355 aaKnown RBP10.73□□□□□ -0.69
SMAD3-211ENST00000559460 TEAD2Q15562 447 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 TMEM132AQ24JP5 1023 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 TRIM61Q5EBN2 209 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 PMS2CLQ68D20 193 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 EXOC6Q8TAG9 804 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 SLC39A7Q92504 469 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 PIGKQ92643 395 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 CCDC136Q96JN2 1154 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 CEP89Q96ST8 783 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 THG1LQ9NWX6 298 aaKnown RBP10.73□□□□□ -0.69
SMAD3-211ENST00000559460 RAXQ9Y2V3 346 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 PPME1Q9Y570 386 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 V9GY48 417 aaPredicted RBP10.73□□□□□ -0.69
SMAD3-211ENST00000559460 SPAG17Q6Q759 2223 aa10.73□□□□□ -0.69
SMAD3-211ENST00000559460 PDCD11Q14690 1871 aaKnown RBP10.72□□□□□ -0.69
SMAD3-211ENST00000559460 SDK1Q7Z5N4 2213 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 CCDC194A0A1B0GVG4 234 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 PATE3B3GLJ2 98 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 TK2O00142 265 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 NRG2O14511 850 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-211ENST00000559460 RNF40O75150 1001 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 PRKCBP05771 671 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 PLA2G2AP14555 144 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 ATF2P15336 505 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 FGFR3P22607 806 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 GNA11P29992 359 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 CIITAP33076 1130 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 LIFRP42702 1097 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 AMPD2Q01433 879 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 ROR1Q01973 937 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 MXD4Q14582 209 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-211ENST00000559460 ITPRIPL2Q3MIP1 535 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 WDR44Q5JSH3 913 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 PKN3Q6P5Z2 889 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 POTEHQ6S545 545 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 ANO5Q75V66 913 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 GSTCDQ8NEC7 633 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 BICD2Q8TD16 824 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 CRYGNQ8WXF5 182 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 ACDQ96AP0 544 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 EVLQ9UI08 416 aaPredicted RBP10.72□□□□□ -0.69
SMAD3-211ENST00000559460 PCDHB9Q9Y5E1 797 aa10.72□□□□□ -0.69
SMAD3-211ENST00000559460 MEFVO15553 781 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-211ENST00000559460 DSPP15924 2871 aaKnown RBP10.71□□□□□ -0.69
SMAD3-211ENST00000559460 ENGP17813 658 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 ARF4P18085 180 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-211ENST00000559460 TKTP29401 623 aaKnown RBP10.71□□□□□ -0.69
SMAD3-211ENST00000559460 NPEPPSP55786 919 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 TWF1Q12792 350 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 RAB44Q7Z6P3 723 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-211ENST00000559460 FERMT3Q86UX7 667 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 TCEAL8Q8IYN2 117 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 HS6ST3Q8IZP7 471 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 MDM1Q8TC05 714 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 SLC5A5Q92911 643 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 DDX27Q96GQ7 796 aaKnown RBP10.71□□□□□ -0.69
SMAD3-211ENST00000559460 ZFYVE19Q96K21 471 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 NOTCH4Q99466 2003 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 MTRQ99707 1265 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 GTPBP2Q9BX10 602 aaKnown RBP10.71□□□□□ -0.69
SMAD3-211ENST00000559460 SNTG2Q9NY99 539 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 TPCN1Q9ULQ1 816 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 CIZ1Q9ULV3 898 aaPredicted RBP10.71□□□□□ -0.69
SMAD3-211ENST00000559460 INVSQ9Y283 1065 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 RAI2Q9Y5P3 530 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 STK24Q9Y6E0 443 aa10.71□□□□□ -0.69
SMAD3-211ENST00000559460 NBEAQ8NFP9 2946 aa10.71□□□□□ -0.7
SMAD3-211ENST00000559460 NCANO14594 1321 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 MAST4O15021 2626 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 A0A1W2PRU2 124 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 UPK3BL1B0FP48 263 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 UPK3BL2E5RIL1 263 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 H7C4K7 107 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 J3QKU1 62 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 CAPN9O14815 690 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 OPHN1O60890 802 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 CAPNS1P04632 268 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 CFIP05156 583 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 DPP6P42658 865 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 PTENP60484 403 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 PSMD2Q13200 908 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 EMC2Q15006 297 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 MAPK6Q16659 721 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 RTN1Q16799 776 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 FBXO43Q4G163 708 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 ARHGAP15Q53QZ3 475 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 LARP1BQ659C4 914 aaKnown RBP10.7□□□□□ -0.7
SMAD3-211ENST00000559460 TPGS2Q68CL5 300 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 LMBRD2Q68DH5 695 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-211ENST00000559460 SLC8B1Q6J4K2 584 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 OTUD6AQ7L8S5 288 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 CDR2LQ86X02 465 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-211ENST00000559460 ARID3BQ8IVW6 561 aaPredicted RBP10.7□□□□□ -0.7
SMAD3-211ENST00000559460 TSTD1Q8NFU3 115 aa10.7□□□□□ -0.7
SMAD3-211ENST00000559460 LENG9Q96B70 501 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms