RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 LRRC63Q05C16 580 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 TYRO3Q06418 890 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 PPP3CAQ08209 521 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 GPM6BQ13491 265 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 MYBPC2Q14324 1141 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 HSP90AA2PQ14568 343 aaPredicted RBP11.81□□□□□ -0.52
TPM1-217ENST00000559108 TMEM132DQ14C87 1099 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 KYAT1Q16773 422 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 SPOUT1Q5T280 376 aaKnown RBP11.81□□□□□ -0.52
TPM1-217ENST00000559108 ZNF697Q5TEC3 545 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 MLKLQ8NB16 471 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 PARD3BQ8TEW8 1205 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 AUTS2Q8WXX7 1259 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 CGRRF1Q99675 332 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 DNAJC25Q9H1X3 360 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 HSD3B7Q9H2F3 369 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 ASB7Q9H672 318 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 INTS13Q9NVM9 706 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 RNF216Q9NWF9 866 aaPredicted RBP11.81□□□□□ -0.52
TPM1-217ENST00000559108 MTMR10Q9NXD2 777 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 RWDD2AQ9UIY3 292 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 C2CD2Q9Y426 696 aa11.81□□□□□ -0.52
TPM1-217ENST00000559108 PODXLO00592 558 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 PIRO00625 290 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 KIF20AO95235 890 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 IL18RAPO95256 599 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 VNN1O95497 513 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 DLATP10515 647 aaKnown RBP11.8□□□□□ -0.52
TPM1-217ENST00000559108 TFAMQ00059 246 aaKnown RBP11.8□□□□□ -0.52
TPM1-217ENST00000559108 POU5F1Q01860 360 aaKnown RBP11.8□□□□□ -0.52
TPM1-217ENST00000559108 NCAPHQ15003 741 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 ZSCAN23Q3MJ62 389 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 TDRD10Q5VZ19 366 aaKnown RBP11.8□□□□□ -0.52
TPM1-217ENST00000559108 C9orf57Q5W0N0 161 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 FOXR2Q6PJQ5 311 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 C15orf39Q6ZRI6 1047 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 FAM186BQ8IYM0 893 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 MYLIPQ8WY64 445 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 CDX2Q99626 313 aaPredicted RBP11.8□□□□□ -0.52
TPM1-217ENST00000559108 PLVAPQ9BX97 442 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 SPG21Q9NZD8 308 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 UBQLN1Q9UMX0 589 aaKnown RBP11.8□□□□□ -0.52
TPM1-217ENST00000559108 FAN1Q9Y2M0 1017 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 DERAQ9Y315 318 aa11.8□□□□□ -0.52
TPM1-217ENST00000559108 TMEM189-UBE2V1I3L0A0 370 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 TULP1O00294 542 aaPredicted RBP11.79□□□□□ -0.52
TPM1-217ENST00000559108 FSCN2O14926 492 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 MAPK13O15264 365 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 CST3P01034 146 aaPredicted RBP11.79□□□□□ -0.52
TPM1-217ENST00000559108 C4BPAP04003 597 aaKnown RBP11.79□□□□□ -0.52
TPM1-217ENST00000559108 ITGB3P05106 788 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 CYP3A5P20815 502 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 POLR2BP30876 1174 aaKnown RBP11.79□□□□□ -0.52
TPM1-217ENST00000559108 FKBP3Q00688 224 aaKnown RBP11.79□□□□□ -0.52
TPM1-217ENST00000559108 PLCB3Q01970 1234 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 BFSP1Q12934 665 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 STIM1Q13586 685 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 STX1AQ16623 288 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 ANO6Q4KMQ2 910 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 TIGD5Q53EQ6 642 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 HSP90AA4PQ58FG1 418 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 GPR153Q6NV75 609 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 FUT10Q6P4F1 479 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 ADGRD2Q7Z7M1 963 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 WDR49Q8IV35 697 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 CD302Q8IX05 232 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 DEFB123Q8N688 67 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 CSGALNACT2Q8N6G5 542 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 POF1BQ8WVV4 589 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 RSPH1Q8WYR4 309 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 SLC35C1Q96A29 364 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 SAMD11Q96NU1 681 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 FAM193BQ96PV7 902 aaPredicted RBP11.79□□□□□ -0.52
TPM1-217ENST00000559108 MKNK1Q9BUB5 465 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 SRRTQ9BXP5 876 aaKnown RBP11.79□□□□□ -0.52
TPM1-217ENST00000559108 ZBP1Q9H171 429 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 KIAA1586Q9HCI6 787 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 SAMSN1Q9NSI8 373 aaKnown RBP11.79□□□□□ -0.52
TPM1-217ENST00000559108 DPP3Q9NY33 737 aa11.79□□□□□ -0.52
TPM1-217ENST00000559108 HIDE1A8MVS5 230 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 CETN3O15182 167 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 SLC16A3O15427 465 aaKnown RBP11.78□□□□□ -0.52
TPM1-217ENST00000559108 HCRTO43612 131 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 B3GAT3O94766 335 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 ALDH2P05091 517 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 RB1P06400 928 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 TKTP29401 623 aaKnown RBP11.78□□□□□ -0.52
TPM1-217ENST00000559108 PSMC2P35998 433 aaKnown RBP11.78□□□□□ -0.52
TPM1-217ENST00000559108 GCLMP48507 274 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 ALDH7A1P49419 539 aaKnown RBP11.78□□□□□ -0.52
TPM1-217ENST00000559108 AARSP49588 968 aaKnown RBP eCLIP11.78□□□□□ -0.52
TPM1-217ENST00000559108 VAMP7P51809 220 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 RBM10P98175 930 aaKnown RBP11.78□□□□□ -0.52
TPM1-217ENST00000559108 CBWD6Q4V339 395 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 CBWD3Q5JTY5 395 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 RTP2Q5QGT7 225 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 CBWD5Q5RIA9 395 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 SASS6Q6UVJ0 657 aa11.78□□□□□ -0.52
TPM1-217ENST00000559108 RSPO2Q6UXX9 243 aaPredicted RBP11.78□□□□□ -0.52
TPM1-217ENST00000559108 TRAPPC11Q7Z392 1133 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms