RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 TRAPPC11Q7Z392 1133 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 FAM228AQ86W67 206 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 KSR1Q8IVT5 923 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 ZC3H3Q8IXZ2 948 aaKnown RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 MSANTD4Q8NCY6 345 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 GLIS3Q8NEA6 775 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 TRIM58Q8NG06 486 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 PHOSPHO2Q8TCD6 241 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 SCFD1Q8WVM8 642 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 NLRP7Q8WX94 980 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 SYN2Q92777 582 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 NLRP4Q96MN2 994 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 FDXACB1Q9BRP7 624 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 MKNK1Q9BUB5 465 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 KCTD10Q9H3F6 313 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 ACBD3Q9H3P7 528 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 MINDY3Q9H8M7 445 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 RC3H2Q9HBD1 1191 aaKnown RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 METTL14Q9HCE5 456 aaKnown RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 TYW1Q9NV66 732 aaKnown RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 ZNF446Q9NWS9 450 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 TRIM10Q9UDY6 481 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 ARMCX3Q9UH62 379 aaPredicted RBP8.3□□□□□ -1.08
LRRC28-211ENST00000558890 TNFSF13BQ9Y275 285 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 SAR1BQ9Y6B6 198 aa8.3□□□□□ -1.08
LRRC28-211ENST00000558890 PRUNE2Q8WUY3 3088 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 MICAL3Q7RTP6 2002 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 NPHP3-ACAD11A0A0J9YXS1 232 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 A0A1B0GUA9 196 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 CARNS1A5YM72 827 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 CCDC169A6NNP5 214 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 SLC16A4O15374 487 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 CSDE1O75534 798 aaKnown RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 ERLIN2O94905 339 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 ZRANB2O95218 330 aaKnown RBP eCLIP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 LDHAP00338 332 aaKnown RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 SERPING1P05155 500 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 PRKCBP05771 671 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 LINC00271P0C7V0 271 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 PNMA6AP0CW24 399 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 NR2F2P24468 414 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 HOXA11P31270 313 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 PBX2P40425 430 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 MAGEA1P43355 309 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 FAM193AP78312 1265 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 HTRA4P83105 476 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 RAD51AP2Q09MP3 1159 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 ASIC2Q16515 512 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 DCAF4L1Q3SXM0 396 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 MAP9Q49MG5 647 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 PAPD7Q5XG87 772 aaKnown RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 NOTUMQ6P988 496 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 FRMD5Q7Z6J6 570 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 TMCO2Q7Z6W1 182 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 TRIM59Q8IWR1 403 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 BAP1Q92560 729 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 TOP1MTQ969P6 601 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 ZNF668Q96K58 619 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 RNPC3Q96LT9 517 aaKnown RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 FBXL18Q96ME1 805 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 OSMRQ99650 979 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 PARD6BQ9BYG5 372 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 PBX4Q9BYU1 374 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 TTYH1Q9H313 450 aaPredicted RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 PTPRHQ9HD43 1115 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 C1orf112Q9NSG2 853 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 FAM53CQ9NYF3 392 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 ST3GAL5Q9UNP4 418 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 YBX2Q9Y2T7 364 aaKnown RBP8.29□□□□□ -1.08
LRRC28-211ENST00000558890 PCDHA13Q9Y5I0 950 aa8.29□□□□□ -1.08
LRRC28-211ENST00000558890 PDCD11Q14690 1871 aaKnown RBP8.28□□□□□ -1.08
LRRC28-211ENST00000558890 MACROD2A1Z1Q3 448 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 C9IYK1 514 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 INO80B-WBP1J3KQ70 363 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 HNRNPDLO14979 420 aaKnown RBP8.28□□□□□ -1.08
LRRC28-211ENST00000558890 EPHB6O15197 1021 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 INPPL1O15357 1258 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 TSPAN1O60635 241 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 ZNF623O75123 536 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 RPS6KA5O75582 802 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 LCA5LO95447 670 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 AFPP02771 609 aaKnown RBP8.28□□□□□ -1.08
LRRC28-211ENST00000558890 NR3C1P04150 777 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 ATP1A1P05023 1023 aaKnown RBP8.28□□□□□ -1.08
LRRC28-211ENST00000558890 MCF2P10911 925 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 MYOGP15173 224 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 ANXA13P27216 316 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 CASP5P51878 434 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 MCL1Q07820 350 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 PAK2Q13177 524 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 PRPF4BQ13523 1007 aaKnown RBP8.28□□□□□ -1.08
LRRC28-211ENST00000558890 RAPGEF1Q13905 1077 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 IKBKEQ14164 716 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 SLC27A1Q6PCB7 646 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 MPZL3Q6UWV2 235 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 TAS1R3Q7RTX0 852 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 USP37Q86T82 979 aa8.28□□□□□ -1.08
LRRC28-211ENST00000558890 NT5DC4Q86YG4 428 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms