RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 TIMM13Q9Y5L4 95 aaPredicted RBP13.65□□□□□ -0.22
SMAD3-208ENST00000558827 CDY1Q9Y6F8 540 aa13.65□□□□□ -0.22
SMAD3-208ENST00000558827 PPEF2O14830 753 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 N4BP1O75113 896 aaKnown RBP13.64□□□□□ -0.23
SMAD3-208ENST00000558827 CLTAP09496 248 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 ZSCAN22P10073 491 aaPredicted RBP13.64□□□□□ -0.23
SMAD3-208ENST00000558827 MCM4P33991 863 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 ELAVL2Q12926 359 aaKnown RBP13.64□□□□□ -0.23
SMAD3-208ENST00000558827 ENOX2Q16206 610 aaKnown RBP13.64□□□□□ -0.23
SMAD3-208ENST00000558827 CCDC73Q6ZRK6 1079 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 ZSWIM2Q8NEG5 633 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 NOC3LQ8WTT2 800 aaKnown RBP13.64□□□□□ -0.23
SMAD3-208ENST00000558827 RSAD2Q8WXG1 361 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 DHX58Q96C10 678 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 DNAJC19Q96DA6 116 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 UROC1Q96N76 676 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 MYADMQ96S97 322 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 MRPL44Q9H9J2 332 aaKnown RBP13.64□□□□□ -0.23
SMAD3-208ENST00000558827 RPF1Q9H9Y2 349 aaKnown RBP13.64□□□□□ -0.23
SMAD3-208ENST00000558827 SLC38A7Q9NVC3 462 aa13.64□□□□□ -0.23
SMAD3-208ENST00000558827 A0A0B4J269 797 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 TTC26A0AVF1 554 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 TMEM189-UBE2V1I3L0A0 370 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 OGTO15294 1046 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 TRAPPC3O43617 180 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 ZMYND10O75800 440 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 GCNT3O95395 438 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 F13A1P00488 732 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 C8AP07357 584 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 CASP5P51878 434 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 GTF2BQ00403 316 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 PPP2R3AQ06190 1150 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 PPM1LQ5SGD2 360 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 VARS2Q5ST30 1063 aaKnown RBP13.63□□□□□ -0.23
SMAD3-208ENST00000558827 LIN9Q5TKA1 542 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 ADALQ6DHV7 355 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 JADE1Q6IE81 842 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 GET4Q7L5D6 327 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-208ENST00000558827 ZNF720Q7Z2F6 126 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 GRASPQ7Z6J2 395 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-208ENST00000558827 SLC7A14Q8TBB6 771 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 ACSF2Q96CM8 615 aaPredicted RBP13.63□□□□□ -0.23
SMAD3-208ENST00000558827 FAM84AQ96KN4 292 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 PRKD2Q9BZL6 878 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 PLEKHA4Q9H4M7 779 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 MTRRQ9UBK8 725 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 FBXW11Q9UKB1 542 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 HCN4Q9Y3Q4 1203 aa13.63□□□□□ -0.23
SMAD3-208ENST00000558827 MYH15Q9Y2K3 1946 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 MUC6Q6W4X9 2439 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 GOLGA8IPA6NC78 632 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 GOLGA8JA6NMD2 632 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 FAM189A1O60320 539 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 PRPF6O94906 941 aaKnown RBP13.62□□□□□ -0.23
SMAD3-208ENST00000558827 PIGRP01833 764 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 NFICP08651 508 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 CASP1P29466 404 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 RPL9P32969 192 aaKnown RBP13.62□□□□□ -0.23
SMAD3-208ENST00000558827 CREMQ03060 361 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 DNM1Q05193 864 aaKnown RBP13.62□□□□□ -0.23
SMAD3-208ENST00000558827 RAB33AQ14088 237 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 AXDND1Q5T1B0 1012 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-208ENST00000558827 ELMSAN1Q6PJG2 1045 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 SHC4Q6S5L8 630 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 C15orf39Q6ZRI6 1047 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 OTOP3Q7RTS5 596 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 MAP4K3Q8IVH8 894 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 ZDHHC14Q8IZN3 488 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 GLIS3Q8NEA6 775 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 CMASQ8NFW8 434 aaPredicted RBP13.62□□□□□ -0.23
SMAD3-208ENST00000558827 WDR6Q9NNW5 1121 aaKnown RBP13.62□□□□□ -0.23
SMAD3-208ENST00000558827 PANK4Q9NVE7 773 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 HCFC1R1Q9NWW0 138 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 DPP7Q9UHL4 492 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 CLUHO75153 1309 aa13.62□□□□□ -0.23
SMAD3-208ENST00000558827 PDCD11Q14690 1871 aaKnown RBP13.61□□□□□ -0.23
SMAD3-208ENST00000558827 NARSO43776 548 aaKnown RBP13.61□□□□□ -0.23
SMAD3-208ENST00000558827 SIGLEC14Q08ET2 396 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 CTXN3Q4LDR2 81 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 DSTYKQ6XUX3 929 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 ANKS3Q6ZW76 656 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 PLCD3Q8N3E9 789 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 POMGNT1Q8WZA1 660 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 SAAL1Q96ER3 474 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 PCIF1Q9H4Z3 704 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 FBXL5Q9UKA1 691 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 CPSF3Q9UKF6 684 aaKnown RBP13.61□□□□□ -0.23
SMAD3-208ENST00000558827 AGO2Q9UKV8 859 aaKnown RBP13.61□□□□□ -0.23
SMAD3-208ENST00000558827 SORCS3Q9UPU3 1222 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 DENND4AQ7Z401 1863 aa13.61□□□□□ -0.23
SMAD3-208ENST00000558827 DOCK8Q8NF50 2099 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 WDR27A2RRH5 827 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 CUTAO60888 179 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 SEC24AO95486 1093 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 OR4Q2P0C623 313 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 GAP43P17677 238 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 FSHRP23945 695 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 ADSSP30520 456 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 ME1P48163 572 aa13.6□□□□□ -0.23
SMAD3-208ENST00000558827 VCPP55072 806 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms