RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 COA1Q9GZY4 146 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 CNGB3Q9NQW8 809 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 MAP10Q9P2G4 905 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 CYP26A1O43174 497 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 ARIH2O95376 493 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 DEFA1P59665 94 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 DEFA3P59666 94 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 PAN2Q504Q3 1202 aaKnown RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 AGGF1Q8N302 714 aaeCLIP14.67□□□□□ -0.06
SPG11-210ENST00000558319 TTC13Q8NBP0 860 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 VPS50Q96JG6 964 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 MUC3BQ9H195 1237 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 ENDOD1O94919 500 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 TTLL4Q14679 1199 aa14.67□□□□□ -0.06
SPG11-210ENST00000558319 PRPF39Q86UA1 669 aaKnown RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 RBAKQ9NYW8 714 aaPredicted RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 LIMA1Q9UHB6 759 aaKnown RBP14.67□□□□□ -0.06
SPG11-210ENST00000558319 B2RBV5 119 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 KCNN4O15554 427 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 CAND2O75155 1236 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 PID1Q7Z2X4 250 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 BNIPLQ7Z465 357 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 SPATA2LQ8IUW3 424 aaPredicted RBP14.66□□□□□ -0.06
SPG11-210ENST00000558319 OSBPL5Q9H0X9 879 aaPredicted RBP14.66□□□□□ -0.06
SPG11-210ENST00000558319 NOD2Q9HC29 1040 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 EML4Q9HC35 981 aaKnown RBP14.66□□□□□ -0.06
SPG11-210ENST00000558319 TADA2AO75478 443 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 AKT1P31749 480 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 CDH6P55285 790 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 GCOM2Q9BZD3 368 aaPredicted RBP14.66□□□□□ -0.06
SPG11-210ENST00000558319 HOXC10Q9NYD6 342 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 ATP10AO60312 1499 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 ASNSP08243 561 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 ZNF157P51786 506 aaPredicted RBP14.66□□□□□ -0.06
SPG11-210ENST00000558319 RAB14P61106 215 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 MAPRE2Q15555 327 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 SLFN12LQ6IEE8 588 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 UNC13DQ70J99 1090 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 FAM187AA6NFU0 413 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 DYNC1LI2O43237 492 aaPredicted RBP14.66□□□□□ -0.06
SPG11-210ENST00000558319 GUCY1A2P33402 732 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 ZNF235Q14590 738 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 PPP4R3CPQ6ZMV5 832 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 DPF2Q92785 391 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 EIF2AK1Q9BQI3 630 aaKnown RBP14.66□□□□□ -0.06
SPG11-210ENST00000558319 EMSYQ7Z589 1322 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 SEZ6Q53EL9 994 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 MFSD14CQ5VZR4 134 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 LUZP2Q86TE4 346 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 MDM1Q8TC05 714 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 KLF6Q99612 283 aaPredicted RBP14.66□□□□□ -0.06
SPG11-210ENST00000558319 CCDC134Q9H6E4 229 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 SYTL2Q9HCH5 934 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 CACNA2D2Q9NY47 1150 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 SLC9A2Q9UBY0 812 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 FEM1BQ9UK73 627 aa14.66□□□□□ -0.06
SPG11-210ENST00000558319 PITPNM2Q9BZ72 1349 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 C16orf96A6NNT2 1141 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 TNPO2O14787 897 aaKnown RBP14.65□□□□□ -0.06
SPG11-210ENST00000558319 ATMINO43313 823 aaPredicted RBP14.65□□□□□ -0.06
SPG11-210ENST00000558319 SDC4P31431 198 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 ARL4DP49703 201 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 SYTL3Q4VX76 610 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 NAALADL2Q58DX5 795 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 OMA1Q96E52 524 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 MRPL1Q9BYD6 325 aaKnown RBP14.65□□□□□ -0.06
SPG11-210ENST00000558319 PCMTD2Q9NV79 361 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 TJP2Q9UDY2 1190 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 PTPRTO14522 1441 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 TARSL2A2RTX5 802 aaKnown RBP14.65□□□□□ -0.06
SPG11-210ENST00000558319 RGS5O15539 181 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 SMNDC1O75940 238 aaKnown RBP eCLIP14.65□□□□□ -0.06
SPG11-210ENST00000558319 C6orf222P0C671 652 aaPredicted RBP14.65□□□□□ -0.06
SPG11-210ENST00000558319 UBA3Q8TBC4 463 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 CFAP43Q8NDM7 1665 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 GRIN1Q05586 938 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 RUNX1T1Q06455 604 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 SMTNL2Q2TAL5 461 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 DDHD1Q8NEL9 900 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 FAM162AQ96A26 154 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 NMD3Q96D46 503 aaKnown RBP14.65□□□□□ -0.06
SPG11-210ENST00000558319 RNPC3Q96LT9 517 aaKnown RBP14.65□□□□□ -0.06
SPG11-210ENST00000558319 CD209Q9NNX6 404 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 FAM49BQ9NUQ9 324 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 LAMB3Q13751 1172 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 C6orf10Q5SRN2 563 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 PLA2G4FQ68DD2 849 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 WNT8AQ9H1J5 351 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 SEPT3Q9UH03 358 aa14.65□□□□□ -0.06
SPG11-210ENST00000558319 MAP3K6O95382 1288 aa14.65□□□□□ -0.07
SPG11-210ENST00000558319 JAK3P52333 1124 aa14.65□□□□□ -0.07
SPG11-210ENST00000558319 TFDP2Q14188 446 aa14.65□□□□□ -0.07
SPG11-210ENST00000558319 TCEA2Q15560 299 aa14.65□□□□□ -0.07
SPG11-210ENST00000558319 P3H1Q32P28 736 aa14.65□□□□□ -0.07
SPG11-210ENST00000558319 MIER2Q8N344 545 aa14.65□□□□□ -0.07
SPG11-210ENST00000558319 ZNF786Q8N393 782 aa14.65□□□□□ -0.07
SPG11-210ENST00000558319 LRRC71Q8N4P6 559 aa14.65□□□□□ -0.07
SPG11-210ENST00000558319 ELMO2Q96JJ3 720 aa14.65□□□□□ -0.07
SPG11-210ENST00000558319 XPO6Q96QU8 1125 aaKnown RBP14.65□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms