RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 ALKAL1Q6UXT8 129 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 TAS1R1Q7RTX1 841 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 FMR1NBQ8N0W7 255 aaPredicted RBP9.74□□□□□ -0.85
SPG11-207ENST00000558138 GOLGA5Q8TBA6 731 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 ZNF507Q8TCN5 953 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 CACTINQ8WUQ7 758 aaKnown RBP9.74□□□□□ -0.85
SPG11-207ENST00000558138 SCFD1Q8WVM8 642 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 SMARCE1Q969G3 411 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 GBP4Q96PP9 640 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 ASB2Q96Q27 587 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 FNBP1Q96RU3 617 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 STRA6Q9BX79 667 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 VN1R3Q9BXE9 311 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 GPR62Q9BZJ7 368 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 ASB7Q9H672 318 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.74□□□□□ -0.85
SPG11-207ENST00000558138 AGPAT3Q9NRZ7 376 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 HSPBP1Q9NZL4 362 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 CD207Q9UJ71 328 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 MAPK8IP1Q9UQF2 711 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 STYXL1Q9Y6J8 313 aa9.74□□□□□ -0.85
SPG11-207ENST00000558138 MYO7AQ13402 2215 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 KLRC4O43908 158 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 GADD45BO75293 160 aaPredicted RBP9.73□□□□□ -0.85
SPG11-207ENST00000558138 GLUD1P00367 558 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 TNNC2P02585 160 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 CNPP09543 421 aaKnown RBP9.73□□□□□ -0.85
SPG11-207ENST00000558138 DLATP10515 647 aaKnown RBP9.73□□□□□ -0.85
SPG11-207ENST00000558138 RPL17P18621 184 aaKnown RBP9.73□□□□□ -0.85
SPG11-207ENST00000558138 TKTP29401 623 aaKnown RBP9.73□□□□□ -0.85
SPG11-207ENST00000558138 ADSSP30520 456 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 GUCY2FP51841 1108 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 ARPP19P56211 112 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 UBE2HP62256 183 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 DSG1Q02413 1049 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 DPYDQ12882 1025 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 STK4Q13043 487 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 ADAM15Q13444 863 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 STIM1Q13586 685 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 SURF1Q15526 300 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 NAB2Q15742 525 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 PSMD5Q16401 504 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 PUS10Q3MIT2 529 aaKnown RBP9.73□□□□□ -0.85
SPG11-207ENST00000558138 PRSS55Q6UWB4 352 aaPredicted RBP9.73□□□□□ -0.85
SPG11-207ENST00000558138 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.73□□□□□ -0.85
SPG11-207ENST00000558138 EPM2AIP1Q7L775 607 aaPredicted RBP9.73□□□□□ -0.85
SPG11-207ENST00000558138 USP37Q86T82 979 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 PALB2Q86YC2 1186 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 BRSK2Q8IWQ3 736 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 XXYLT1Q8NBI6 393 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 ANKRD36BP1Q96IX9 119 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 KLHL5Q96PQ7 755 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 TSPAN18Q96SJ8 248 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 KIAA1586Q9HCI6 787 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 DPP3Q9NY33 737 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 CGNQ9P2M7 1197 aaKnown RBP9.73□□□□□ -0.85
SPG11-207ENST00000558138 DPP7Q9UHL4 492 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 DERAQ9Y315 318 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 HCFC2Q9Y5Z7 792 aa9.73□□□□□ -0.85
SPG11-207ENST00000558138 TRANK1O15050 2925 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 ARHGEF37A1IGU5 675 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 H7C4K7 107 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 TMEM189-UBE2V1I3L0A0 370 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 TEX28O15482 410 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 FAM189A1O60320 539 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 TBX10O75333 385 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 RHOBTB3O94955 611 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 EPCAMP16422 314 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 TNNI1P19237 187 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 CYP3A5P20815 502 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 SSTR3P32745 418 aaPredicted RBP9.72□□□□□ -0.85
SPG11-207ENST00000558138 SNRPFP62306 86 aaKnown RBP9.72□□□□□ -0.85
SPG11-207ENST00000558138 RBM10P98175 930 aaKnown RBP9.72□□□□□ -0.85
SPG11-207ENST00000558138 EHHADHQ08426 723 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 KCNB1Q14721 858 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 SNRNP35Q16560 246 aaKnown RBP9.72□□□□□ -0.85
SPG11-207ENST00000558138 BMT2Q1RMZ1 405 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 LEXMQ3ZCV2 418 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 RTP2Q5QGT7 225 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 RARS2Q5T160 578 aaKnown RBP9.72□□□□□ -0.85
SPG11-207ENST00000558138 LIN9Q5TKA1 542 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 CEP135Q66GS9 1140 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 CES5AQ6NT32 575 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 ANKRD54Q6NXT1 300 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 ANKS3Q6ZW76 656 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 KIAA0895Q8NCT3 520 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 APPL2Q8NEU8 664 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 ERCC4Q92889 916 aaPredicted RBP9.72□□□□□ -0.85
SPG11-207ENST00000558138 CCDC127Q96BQ5 260 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 ZNF560Q96MR9 790 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 TIGD1Q96MW7 591 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 TSG101Q99816 390 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 TSHZ2Q9NRE2 1034 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 DZANK1Q9NVP4 752 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 FRMD4BQ9Y2L6 1034 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 C2CD2Q9Y426 696 aa9.72□□□□□ -0.85
SPG11-207ENST00000558138 PDCD11Q14690 1871 aaKnown RBP9.72□□□□□ -0.85
SPG11-207ENST00000558138 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 MEFVO15553 781 aaPredicted RBP9.71□□□□□ -0.86
SPG11-207ENST00000558138 PHACTR2O75167 634 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms