RNA–Protein interactions for RNA: ENST00000557945.5

CASC4-204, Transcript of cancer susceptibility 4, humanhuman

TSL 1 (best)

Gene CASC4, Length 1,386 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-204ENST00000557945 TMEM130Q8N3G9 435 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 OR5B17Q8NGF7 314 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 BORCS6Q96GS4 357 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 UROC1Q96N76 676 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 MTMR12Q9C0I1 747 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 THAP9Q9H5L6 903 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 DPP3Q9NY33 737 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 MAGEC2Q9UBF1 373 aaPredicted RBP23.01■■□□□ 1.27
CASC4-204ENST00000557945 RWDD3Q9Y3V2 267 aa23.01■■□□□ 1.27
CASC4-204ENST00000557945 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.01■■□□□ 1.27
CASC4-204ENST00000557945 ANK1P16157 1881 aa23■■□□□ 1.27
CASC4-204ENST00000557945 NRP1O14786 923 aa23■■□□□ 1.27
CASC4-204ENST00000557945 LINC00271P0C7V0 271 aa23■■□□□ 1.27
CASC4-204ENST00000557945 TRIM49P0CI25 452 aa23■■□□□ 1.27
CASC4-204ENST00000557945 TRIM49CP0CI26 452 aa23■■□□□ 1.27
CASC4-204ENST00000557945 BMPR1AP36894 532 aa23■■□□□ 1.27
CASC4-204ENST00000557945 LRSAM1Q6UWE0 723 aa23■■□□□ 1.27
CASC4-204ENST00000557945 FAM114A1Q8IWE2 563 aa23■■□□□ 1.27
CASC4-204ENST00000557945 DDX27Q96GQ7 796 aaKnown RBP23■■□□□ 1.27
CASC4-204ENST00000557945 CNOT6LQ96LI5 555 aaKnown RBP23■■□□□ 1.27
CASC4-204ENST00000557945 BPIFA3Q9BQP9 254 aa23■■□□□ 1.27
CASC4-204ENST00000557945 PAAF1Q9BRP4 392 aa23■■□□□ 1.27
CASC4-204ENST00000557945 COLEC11Q9BWP8 271 aa23■■□□□ 1.27
CASC4-204ENST00000557945 TSPY26PQ9H489 355 aa23■■□□□ 1.27
CASC4-204ENST00000557945 MMRN2Q9H8L6 949 aa23■■□□□ 1.27
CASC4-204ENST00000557945 CERS4Q9HA82 394 aa23■■□□□ 1.27
CASC4-204ENST00000557945 SOX1O00570 391 aaPredicted RBP22.99■■□□□ 1.27
CASC4-204ENST00000557945 RPL9P32969 192 aaKnown RBP22.99■■□□□ 1.27
CASC4-204ENST00000557945 CLCNKBP51801 687 aa22.99■■□□□ 1.27
CASC4-204ENST00000557945 SAMD11Q96NU1 681 aa22.99■■□□□ 1.27
CASC4-204ENST00000557945 SAMSN1Q9NSI8 373 aaKnown RBP22.99■■□□□ 1.27
CASC4-204ENST00000557945 LAMA3Q16787 3333 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 SMTNL1A8MU46 457 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 PODXLO00592 558 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 KRT19P08727 400 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 ERVK-21P61565 698 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 EPC2Q52LR7 807 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 C1orf220Q5T0J3 134 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 IRF2BP1Q8IU81 584 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 ARNTL2Q8WYA1 636 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 ZNF516Q92618 1163 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 FANCLQ9NW38 375 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 SPG21Q9NZD8 308 aa22.98■■□□□ 1.27
CASC4-204ENST00000557945 R3HCC1Q9Y3T6 440 aaKnown RBP22.98■■□□□ 1.27
CASC4-204ENST00000557945 PDCD11Q14690 1871 aaKnown RBP22.98■■□□□ 1.27
CASC4-204ENST00000557945 CARNS1A5YM72 827 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 BECN2A8MW95 431 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 F8W810 466 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 IKBKBO14920 756 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 PHACTR2O75167 634 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 B3GAT3O94766 335 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 CAVIN2O95810 425 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 ITGB3P05106 788 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 LRPAP1P30533 357 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 PPM1AP35813 382 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 MTIF2P46199 727 aaKnown RBP22.97■■□□□ 1.27
CASC4-204ENST00000557945 GCLMP48507 274 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 AP3M2P53677 418 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 ZNF445P59923 1031 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 CLDN10P78369 228 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 ENPEPQ07075 957 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 BIRC3Q13489 604 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 UPP1Q16831 310 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 HABP4Q5JVS0 413 aaKnown RBP22.97■■□□□ 1.27
CASC4-204ENST00000557945 C9orf57Q5W0N0 161 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 DCLRE1AQ6PJP8 1040 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 SLC39A11Q8N1S5 342 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 C1orf127Q8N9H9 656 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 HASPINQ8TF76 798 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 LRCH3Q96II8 777 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 CBX8Q9HC52 389 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 ITGA11Q9UKX5 1188 aa22.97■■□□□ 1.27
CASC4-204ENST00000557945 STX10O60499 249 aa22.96■■□□□ 1.27
CASC4-204ENST00000557945 TADA2AO75478 443 aa22.96■■□□□ 1.27
CASC4-204ENST00000557945 POLR2BP30876 1174 aaKnown RBP22.96■■□□□ 1.27
CASC4-204ENST00000557945 MARSP56192 900 aaKnown RBP22.96■■□□□ 1.27
CASC4-204ENST00000557945 PPP3CAQ08209 521 aa22.96■■□□□ 1.27
CASC4-204ENST00000557945 TRAPPC11Q7Z392 1133 aa22.96■■□□□ 1.27
CASC4-204ENST00000557945 TMEM173Q86WV6 379 aaPredicted RBP22.96■■□□□ 1.27
CASC4-204ENST00000557945 DHX40Q8IX18 779 aaKnown RBP22.96■■□□□ 1.27
CASC4-204ENST00000557945 KLHL23Q8NBE8 558 aa22.96■■□□□ 1.27
CASC4-204ENST00000557945 FBXO22Q8NEZ5 403 aa22.96■■□□□ 1.27
CASC4-204ENST00000557945 TMEM169Q96HH4 297 aa22.96■■□□□ 1.27
CASC4-204ENST00000557945 PLVAPQ9BX97 442 aa22.96■■□□□ 1.27
CASC4-204ENST00000557945 AGAP1Q9UPQ3 857 aa22.96■■□□□ 1.27
CASC4-204ENST00000557945 KCNJ18B7U540 433 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 FGF18O76093 207 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 KIF4AO95239 1232 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 RB1P06400 928 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 RBP5P82980 135 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 KCNJ12Q14500 433 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 NCAPHQ15003 741 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 TRIM59Q8IWR1 403 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 IGSF21Q96ID5 467 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 ZNF576Q9H609 170 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 MARCH5Q9NX47 278 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 NUB1Q9Y5A7 615 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 UTP18Q9Y5J1 556 aaKnown RBP eCLIP22.95■■□□□ 1.26
CASC4-204ENST00000557945 KIAA1671Q9BY89 1806 aa22.95■■□□□ 1.26
CASC4-204ENST00000557945 PPEF2O14830 753 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms