RNA–Protein interactions for RNA: ENST00000557554.5

ABCD4-227, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 523 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-227ENST00000557554 RNF149Q8NC42 400 aa11.14□□□□□ -0.63
ABCD4-227ENST00000557554 ZSCAN18Q8TBC5 510 aaPredicted RBP11.14□□□□□ -0.63
ABCD4-227ENST00000557554 CSGALNACT1Q8TDX6 532 aa11.14□□□□□ -0.63
ABCD4-227ENST00000557554 RUFY2Q8WXA3 655 aa11.14□□□□□ -0.63
ABCD4-227ENST00000557554 PSPC1Q8WXF1 523 aaKnown RBP11.14□□□□□ -0.63
ABCD4-227ENST00000557554 POLR3BQ9NW08 1133 aaPredicted RBP11.14□□□□□ -0.63
ABCD4-227ENST00000557554 SNTG2Q9NY99 539 aa11.14□□□□□ -0.63
ABCD4-227ENST00000557554 GTSE1Q9NYZ3 720 aa11.14□□□□□ -0.63
ABCD4-227ENST00000557554 KALRNO60229 2985 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 PLXNB3Q9ULL4 1909 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 APC2O95996 2303 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 KIF26AQ9ULI4 1882 aaPredicted RBP11.13□□□□□ -0.63
ABCD4-227ENST00000557554 A0A1B0GUA9 196 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 ESYT2A0FGR8 921 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 CASTOR2A6NHX0 329 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 PATE3B3GLJ2 98 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 SGSM2O43147 1006 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 RHOBTB1O94844 696 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 ERLIN2O94905 339 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 ATF2P15336 505 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 GJA1P17302 382 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 POU5F1BQ06416 359 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 LRCH2Q5VUJ6 765 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 CHCHD4Q8N4Q1 142 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 SLC7A3Q8WY07 619 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 E2F7Q96AV8 911 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 CCDC136Q96JN2 1154 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 TEKT3Q9BXF9 490 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 LRRC2Q9BYS8 371 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 CEP72Q9P209 647 aa11.13□□□□□ -0.63
ABCD4-227ENST00000557554 RBM8AQ9Y5S9 174 aaKnown RBP11.13□□□□□ -0.63
ABCD4-227ENST00000557554 SPAARA0A1B0GVQ0 90 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 UPK3BL1B0FP48 263 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 UPK3BL2E5RIL1 263 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 KHNYNO15037 678 aaKnown RBP11.12□□□□□ -0.63
ABCD4-227ENST00000557554 LRG1P02750 347 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 USP11P51784 963 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 PSMC5P62195 406 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 ROR1Q01973 937 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 MBTD1Q05BQ5 628 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 SCAPQ12770 1279 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 AAMPQ13685 434 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 CYP4A22Q5TCH4 519 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 PDZD4Q76G19 769 aaPredicted RBP11.12□□□□□ -0.63
ABCD4-227ENST00000557554 MICU3Q86XE3 530 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 TTC8Q8TAM2 541 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 HNRNPLLQ8WVV9 542 aaKnown RBP11.12□□□□□ -0.63
ABCD4-227ENST00000557554 CHFRQ96EP1 664 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 LRRC3Q9BY71 257 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 WRAP73Q9P2S5 460 aaPredicted RBP11.12□□□□□ -0.63
ABCD4-227ENST00000557554 PARP2Q9UGN5 583 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 DACH1Q9UI36 760 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 URB1O60287 2271 aaKnown RBP11.12□□□□□ -0.63
ABCD4-227ENST00000557554 SHROOM3Q8TF72 1996 aa11.12□□□□□ -0.63
ABCD4-227ENST00000557554 PI4KAP42356 2102 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 THADAQ6YHU6 1953 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 TMEM189-UBE2V1I3L0A0 370 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 B4GALT5O43286 388 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 C1QL1O75973 258 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 TKTP29401 623 aaKnown RBP11.11□□□□□ -0.63
ABCD4-227ENST00000557554 SIM1P81133 766 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-227ENST00000557554 CACNB1Q02641 598 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-227ENST00000557554 NCBP1Q09161 790 aaKnown RBP11.11□□□□□ -0.63
ABCD4-227ENST00000557554 SEMA3BQ13214 749 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 ELF2Q15723 593 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 PFKFB3Q16875 520 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-227ENST00000557554 TMEM196Q5HYL7 178 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 SLC27A1Q6PCB7 646 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 APOA5Q6Q788 366 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 ANKS3Q6ZW76 656 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 RAB44Q7Z6P3 723 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-227ENST00000557554 CDR2LQ86X02 465 aaPredicted RBP11.11□□□□□ -0.63
ABCD4-227ENST00000557554 EXOC8Q8IYI6 725 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 REXO1Q8N1G1 1221 aaKnown RBP11.11□□□□□ -0.63
ABCD4-227ENST00000557554 DDX27Q96GQ7 796 aaKnown RBP11.11□□□□□ -0.63
ABCD4-227ENST00000557554 GPR88Q9GZN0 384 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 RBM28Q9NW13 759 aaKnown RBP11.11□□□□□ -0.63
ABCD4-227ENST00000557554 EBF1Q9UH73 591 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 BRPF3Q9ULD4 1205 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 SLC8A2Q9UPR5 921 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 PPME1Q9Y570 386 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 INSL5Q9Y5Q6 135 aa11.11□□□□□ -0.63
ABCD4-227ENST00000557554 CCDC194A0A1B0GVG4 234 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 H0Y626 953 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 INO80B-WBP1J3KQ70 363 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 EML1O00423 815 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 PRRG1O14668 218 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 ATG13O75143 517 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 TRIM16O95361 564 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 NPTXRO95502 500 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 THP07101 528 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 RFC5P40937 340 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 FAM193AP78312 1265 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 C19orf57Q0VDD7 668 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 TEAD2Q15562 447 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 UAP1L1Q3KQV9 507 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 Q4G0T1 1027 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 FSTL4Q6MZW2 842 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 GPIHBP1Q8IV16 184 aa11.1□□□□□ -0.63
ABCD4-227ENST00000557554 YAF2Q8IY57 180 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms