RNA–Protein interactions for RNA: ENST00000557548.1

TRAV28-201, Transcript of T cell receptor alpha variable 28 (pseudogene), humanhuman

BASIC

Gene TRAV28, Length 323 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV28-201ENST00000557548 CYP2C8P10632 490 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 HDCP19113 662 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 FPR1P21462 350 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 TNFAIP3P21580 790 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 EXOSC9Q06265 439 aaKnown RBP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 CACNB2Q08289 660 aaPredicted RBP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 TBX2Q13207 712 aaPredicted RBP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 MTM1Q13496 603 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 POSTNQ15063 836 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 TAF5Q15542 800 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 C19orf54Q5BKX5 351 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 DACT2Q5SW24 774 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 MZT2AQ6P582 158 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 CYP26C1Q6V0L0 522 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 TAS1R1Q7RTX1 841 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 MAATS1Q7Z4T9 603 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 FAM90A1Q86YD7 464 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 SUGP1Q8IWZ8 645 aaKnown RBP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 TRMT2AQ8IZ69 625 aaKnown RBP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 FANCBQ8NB91 859 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 REPS2Q8NFH8 660 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 IL17REQ8NFR9 667 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 OR6B3Q8NGW1 331 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 KBTBD7Q8WVZ9 684 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 STON2Q8WXE9 905 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 MAML1Q92585 1016 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 TNPO1Q92973 898 aaKnown RBP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 CYFIP2Q96F07 1278 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 SNX22Q96L94 193 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 UBXN10Q96LJ8 280 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 UIMC1Q96RL1 719 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 PAGR1Q9BTK6 254 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 SORBS1Q9BX66 1292 aaKnown RBP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 OBP2BQ9NPH6 170 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 SLAMF7Q9NQ25 335 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 DACT1Q9NYF0 836 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 Q9UFV3 132 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 SRRDQ9UH36 339 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 CROTQ9UKG9 612 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 SLC39A10Q9ULF5 831 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 LAS1LQ9Y4W2 734 aaKnown RBP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.73□□□□□ -1.81
TRAV28-201ENST00000557548 SCINQ9Y6U3 715 aa3.73□□□□□ -1.81
TRAV28-201ENST00000557548 GOLGA6L3A6NEY3 463 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 AQP12BA6NM10 295 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 EIF3FO00303 357 aaPredicted RBP3.72□□□□□ -1.81
TRAV28-201ENST00000557548 WNT10BO00744 389 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 NPC1O15118 1278 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 ARHGAP6O43182 974 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 ITGA10O75578 1167 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 ALDH1A2O94788 518 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 FBLN1P23142 703 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 GUCY1A2P33402 732 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 PHKA1P46020 1223 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 KCNJ5P48544 419 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 PIK3CGP48736 1102 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 KCNQ1P51787 676 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 ARFIP2P53365 341 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 ITGA8P53708 1063 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 ITGA1P56199 1179 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 CTXN1P60606 82 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 YBX1P67809 324 aaKnown RBP3.72□□□□□ -1.81
TRAV28-201ENST00000557548 SLC13A2Q13183 592 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 DDX10Q13206 875 aaKnown RBP3.72□□□□□ -1.81
TRAV28-201ENST00000557548 ADAM9Q13443 819 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 ZNF783Q6ZMS7 281 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 TP53INP2Q8IXH6 220 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 LILRA3Q8N6C8 439 aaPredicted RBP3.72□□□□□ -1.81
TRAV28-201ENST00000557548 DCBLD1Q8N8Z6 715 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 PCSK9Q8NBP7 692 aaKnown RBP3.72□□□□□ -1.81
TRAV28-201ENST00000557548 NAXEQ8NCW5 288 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 SMARCC2Q8TAQ2 1214 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 CPA5Q8WXQ8 436 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 NMD3Q96D46 503 aaKnown RBP3.72□□□□□ -1.81
TRAV28-201ENST00000557548 CLIC6Q96NY7 704 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 HEPHQ9BQS7 1158 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 SLC6A17Q9H1V8 727 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 SMURF2Q9HAU4 748 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 SERHLQ9NQF3 203 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 TMEM140Q9NV12 185 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 SPATA6Q9NWH7 488 aaPredicted RBP3.72□□□□□ -1.81
TRAV28-201ENST00000557548 GPRC5DQ9NZD1 345 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 MAN2B2Q9Y2E5 1009 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 ACTL7AQ9Y615 435 aa3.72□□□□□ -1.81
TRAV28-201ENST00000557548 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.72□□□□□ -1.81
TRAV28-201ENST00000557548 A0A1B0GVC2 190 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 FAM234BA2RU67 622 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 TRIM43BA6NCK2 446 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 J3KRW8 73 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 SYT5O00445 386 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 BTN3A1O00481 513 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 PODXLO00592 558 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 ABLIM1O14639 778 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 DAPK3O43293 454 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 THAP12O43422 761 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 TBC1D4O60343 1298 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 MATN4O95460 622 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 MT-ND5P03915 603 aa3.71□□□□□ -1.82
TRAV28-201ENST00000557548 ANXA2P07355 339 aaKnown RBP3.71□□□□□ -1.82
TRAV28-201ENST00000557548 LDHCP07864 332 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms