RNA–Protein interactions for RNA: ENST00000557358.1

VPS33B-206, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-206ENST00000557358 RARS2Q5T160 578 aaKnown RBP15.01□□□□□ -0.01
VPS33B-206ENST00000557358 LIN9Q5TKA1 542 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 ARMCX5Q6P1M9 558 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 APPL2Q8NEU8 664 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 VN1R2Q8NFZ6 395 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 NOC3LQ8WTT2 800 aaKnown RBP15.01□□□□□ -0.01
VPS33B-206ENST00000557358 SLC22A17Q8WUG5 538 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 HDAC7Q8WUI4 952 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 PIK3R5Q8WYR1 880 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 APOL5Q9BWW9 433 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 CHMP5Q9NZZ3 219 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 CACNG4Q9UBN1 327 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 ZDHHC9Q9Y397 364 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 NR2E1Q9Y466 385 aa15.01□□□□□ -0.01
VPS33B-206ENST00000557358 UBE4BO95155 1302 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 LACTBL1A8MY62 500 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 SYN3O14994 580 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 EIF3DO15371 548 aaKnown RBP eCLIP15□□□□□ -0.01
VPS33B-206ENST00000557358 PPP1R37O75864 691 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 MYBP10242 640 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 PFKFB1P16118 471 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 TNFSF9P41273 254 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 ACOT2P49753 483 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 RBM10P98175 930 aaKnown RBP15□□□□□ -0.01
VPS33B-206ENST00000557358 ZP2Q05996 745 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 TMEM132DQ14C87 1099 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 ENOX2Q16206 610 aaKnown RBP15□□□□□ -0.01
VPS33B-206ENST00000557358 SYCE2Q6PIF2 218 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 CYP26C1Q6V0L0 522 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 HS2ST1Q7LGA3 356 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 NT5DC4Q86YG4 428 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 CACTINQ8WUQ7 758 aaKnown RBP15□□□□□ -0.01
VPS33B-206ENST00000557358 ZMAT2Q96NC0 199 aaKnown RBP15□□□□□ -0.01
VPS33B-206ENST00000557358 GOLGA2P5Q9HBQ8 144 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 MAN1C1Q9NR34 630 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 EXOC1Q9NV70 894 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 CPSF3Q9UKF6 684 aaKnown RBP15□□□□□ -0.01
VPS33B-206ENST00000557358 STYXL1Q9Y6J8 313 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 XIRP2A4UGR9 3374 aa15□□□□□ -0.01
VPS33B-206ENST00000557358 A0A1B0GVL5 298 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 A0A1W2PQ27 194 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 A0A1W2PQ64 194 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 A0A1W2PQD8 194 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 ANKRD63C9JTQ0 380 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 PRPF6O94906 941 aaKnown RBP14.99□□□□□ -0.01
VPS33B-206ENST00000557358 KIF20AO95235 890 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 EFEMP2O95967 443 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 ALADP13716 330 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 FGFR3P22607 806 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 SNRPFP62306 86 aaKnown RBP14.99□□□□□ -0.01
VPS33B-206ENST00000557358 RTP2Q5QGT7 225 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 USP37Q86T82 979 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 PALB2Q86YC2 1186 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 GLYCTKQ8IVS8 523 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 FSIP1Q8NA03 581 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 C18orf25Q96B23 403 aaPredicted RBP14.99□□□□□ -0.01
VPS33B-206ENST00000557358 B3GALT6Q96L58 329 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 FAM213AQ9BRX8 229 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 STRA6Q9BX79 667 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 CXCL16Q9H2A7 254 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 PIDD1Q9HB75 910 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 KIAA1586Q9HCI6 787 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 SERTAD1Q9UHV2 236 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 C2CD2Q9Y426 696 aa14.99□□□□□ -0.01
VPS33B-206ENST00000557358 PDCD11Q14690 1871 aaKnown RBP14.99□□□□□ -0.01
VPS33B-206ENST00000557358 LRPAP1P30533 357 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 ELF1P32519 619 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 SOX4Q06945 474 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-206ENST00000557358 SPAG1Q07617 926 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 PSMD2Q13200 908 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 SURF1Q15526 300 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 KANK3Q6NY19 840 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 SLC39A4Q6P5W5 647 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 PRSS55Q6UWB4 352 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-206ENST00000557358 TMC5Q6UXY8 1006 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 DSTYKQ6XUX3 929 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 C15orf39Q6ZRI6 1047 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 CMASQ8NFW8 434 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-206ENST00000557358 SUSD6Q92537 303 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 RPGRIP1Q96KN7 1286 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 OXCT2Q9BYC2 517 aaPredicted RBP14.98□□□□□ -0.01
VPS33B-206ENST00000557358 HAPLN2Q9GZV7 340 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 S1PR5Q9H228 398 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 BLZF1Q9H2G9 400 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 ZDHHC7Q9NXF8 308 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 CGNQ9P2M7 1197 aaKnown RBP14.98□□□□□ -0.01
VPS33B-206ENST00000557358 BACE2Q9Y5Z0 518 aa14.98□□□□□ -0.01
VPS33B-206ENST00000557358 MTCL1Q9Y4B5 1905 aaKnown RBP14.98□□□□□ -0.01
VPS33B-206ENST00000557358 VCANP13611 3396 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 TGM5O43548 720 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 EXTL3O43909 919 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 RPL17P18621 184 aaKnown RBP14.97□□□□□ -0.01
VPS33B-206ENST00000557358 TKTP29401 623 aaKnown RBP14.97□□□□□ -0.01
VPS33B-206ENST00000557358 BRCC3P46736 316 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 CASP5P51878 434 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 ZBTB41Q5SVQ8 909 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 SPATA1Q5VX52 437 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 JADE1Q6IE81 842 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 ZNF280DQ6N043 979 aa14.97□□□□□ -0.01
VPS33B-206ENST00000557358 CCDC149Q6ZUS6 474 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms