RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 KCNE5Q9UJ90 142 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 RUVBL1Q9Y265 456 aaKnown RBP5.78□□□□□ -1.48
VRK1-207ENST00000557352 INSL6Q9Y581 213 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 COX11Q9Y6N1 276 aa5.78□□□□□ -1.48
VRK1-207ENST00000557352 AGXTP21549 392 aa5.77□□□□□ -1.49
VRK1-207ENST00000557352 PTH2RP49190 550 aa5.77□□□□□ -1.49
VRK1-207ENST00000557352 ATP8B2P98198 1209 aa5.77□□□□□ -1.49
VRK1-207ENST00000557352 HNRNPA0Q13151 305 aaKnown RBP5.77□□□□□ -1.49
VRK1-207ENST00000557352 CYP2A13Q16696 494 aa5.77□□□□□ -1.49
VRK1-207ENST00000557352 FBXO42Q6P3S6 717 aa5.77□□□□□ -1.49
VRK1-207ENST00000557352 RD3Q7Z3Z2 195 aa5.77□□□□□ -1.49
VRK1-207ENST00000557352 ATL2Q8NHH9 583 aa5.77□□□□□ -1.49
VRK1-207ENST00000557352 MARS2Q96GW9 593 aaKnown RBP5.77□□□□□ -1.49
VRK1-207ENST00000557352 PHLDB1Q86UU1 1377 aa5.77□□□□□ -1.49
VRK1-207ENST00000557352 MASP2O00187 686 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 ALAS1P13196 640 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 DDCP20711 480 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 IL12RB1P42701 662 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 MRPS21P82921 87 aaKnown RBP5.76□□□□□ -1.49
VRK1-207ENST00000557352 KLF1Q13351 362 aaPredicted RBP5.76□□□□□ -1.49
VRK1-207ENST00000557352 SYCE2Q6PIF2 218 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 FOXR2Q6PJQ5 311 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 Q6ZNX1 250 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 FITM2Q8N6M3 262 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 DPF2Q92785 391 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 GSTO2Q9H4Y5 243 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 MANSC1Q9H8J5 431 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 TBCCD1Q9NVR7 557 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 PRKAB1Q9Y478 270 aa5.76□□□□□ -1.49
VRK1-207ENST00000557352 MYBBP1AQ9BQG0 1328 aaKnown RBP5.75□□□□□ -1.49
VRK1-207ENST00000557352 TCRBV7S2A1N4TA0A589 114 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 TRIM75PA6NK02 468 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 C21orf58P58505 322 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 NOMO3P69849 1222 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 ZNF169Q14929 603 aaPredicted RBP5.75□□□□□ -1.49
VRK1-207ENST00000557352 NOMO2Q5JPE7 1267 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 AMOTL1Q8IY63 956 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 PPM1NQ8N819 430 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 FAM98AQ8NCA5 519 aaKnown RBP5.75□□□□□ -1.49
VRK1-207ENST00000557352 CAGE1Q8TC20 777 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 NUP133Q8WUM0 1156 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 NRG4Q8WWG1 115 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 C7orf25Q9BPX7 421 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 UNKLQ9H9P5 680 aaKnown RBP5.75□□□□□ -1.49
VRK1-207ENST00000557352 CASS4Q9NQ75 786 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 HSFX1Q9UBD0 423 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 INTUQ9ULD6 942 aa5.75□□□□□ -1.49
VRK1-207ENST00000557352 MTO1Q9Y2Z2 717 aaKnown RBP5.75□□□□□ -1.49
VRK1-207ENST00000557352 SPATA31A6Q5VVP1 1343 aa5.74□□□□□ -1.49
VRK1-207ENST00000557352 CDHR4A6H8M9 788 aa5.74□□□□□ -1.49
VRK1-207ENST00000557352 ZFPL1O95159 310 aa5.74□□□□□ -1.49
VRK1-207ENST00000557352 CD38P28907 300 aa5.74□□□□□ -1.49
VRK1-207ENST00000557352 VAV2P52735 878 aa5.74□□□□□ -1.49
VRK1-207ENST00000557352 DACT2Q5SW24 774 aa5.74□□□□□ -1.49
VRK1-207ENST00000557352 RHOT1Q8IXI2 618 aa5.74□□□□□ -1.49
VRK1-207ENST00000557352 PNKPQ96T60 521 aa5.74□□□□□ -1.49
VRK1-207ENST00000557352 RSAD1Q9HA92 442 aa5.74□□□□□ -1.49
VRK1-207ENST00000557352 TLK1Q9UKI8 766 aa5.74□□□□□ -1.49
VRK1-207ENST00000557352 MYADML2A6NDP7 307 aa5.73□□□□□ -1.49
VRK1-207ENST00000557352 KIAA0391O15091 583 aaKnown RBP5.73□□□□□ -1.49
VRK1-207ENST00000557352 ERN1O75460 977 aaKnown RBP5.73□□□□□ -1.49
VRK1-207ENST00000557352 WASP42768 502 aa5.73□□□□□ -1.49
VRK1-207ENST00000557352 SIM1P81133 766 aaPredicted RBP5.73□□□□□ -1.49
VRK1-207ENST00000557352 SLFN5Q08AF3 891 aa5.73□□□□□ -1.49
VRK1-207ENST00000557352 ZNF362Q5T0B9 420 aaPredicted RBP5.73□□□□□ -1.49
VRK1-207ENST00000557352 EGFLAMQ63HQ2 1017 aa5.73□□□□□ -1.49
VRK1-207ENST00000557352 CNTD1Q8N815 330 aa5.73□□□□□ -1.49
VRK1-207ENST00000557352 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.73□□□□□ -1.49
VRK1-207ENST00000557352 TBC1D15Q8TC07 691 aa5.73□□□□□ -1.49
VRK1-207ENST00000557352 SSH1Q8WYL5 1049 aa5.73□□□□□ -1.49
VRK1-207ENST00000557352 PTCD3Q96EY7 689 aaKnown RBP5.73□□□□□ -1.49
VRK1-207ENST00000557352 AIFM2Q9BRQ8 373 aa5.73□□□□□ -1.49
VRK1-207ENST00000557352 C11orf54Q9H0W9 315 aaPredicted RBP5.73□□□□□ -1.49
VRK1-207ENST00000557352 TMX1Q9H3N1 280 aa5.73□□□□□ -1.49
VRK1-207ENST00000557352 FOXJ2Q9P0K8 574 aa5.73□□□□□ -1.49
VRK1-207ENST00000557352 ZNF37AP17032 561 aaPredicted RBP5.72□□□□□ -1.49
VRK1-207ENST00000557352 SLC6A4P31645 630 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 RARRES1P49788 294 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 ELLP55199 621 aaPredicted RBP5.72□□□□□ -1.49
VRK1-207ENST00000557352 CTXN1P60606 82 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 CREMQ03060 361 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 CLUL1Q15846 466 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 GEN1Q17RS7 908 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 INAVAQ3KP66 663 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 COLEC12Q5KU26 742 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 DDX42Q86XP3 938 aaKnown RBP eCLIP5.72□□□□□ -1.49
VRK1-207ENST00000557352 COLGALT2Q8IYK4 626 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 LNX2Q8N448 690 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 DCBLD1Q8N8Z6 715 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 BOLLQ8N9W6 283 aaKnown RBP5.72□□□□□ -1.49
VRK1-207ENST00000557352 Q8NA96 180 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 NLGN4YQ8NFZ3 816 aaPredicted RBP5.72□□□□□ -1.49
VRK1-207ENST00000557352 MED15Q96RN5 788 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 LRFN3Q9BTN0 628 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 DUSP26Q9BV47 211 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 ADARB2Q9NS39 739 aaKnown RBP5.72□□□□□ -1.49
VRK1-207ENST00000557352 SLC5A4Q9NY91 659 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 MCM8Q9UJA3 840 aa5.72□□□□□ -1.49
VRK1-207ENST00000557352 MGST3O14880 152 aa5.71□□□□□ -1.5
VRK1-207ENST00000557352 FCER1AP12319 257 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms