RNA–Protein interactions for RNA: ENST00000557041.1

TMEM55B-207, humanhuman

TSL 2

Gene TMEM55B, Length 3,453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-207ENST00000557041 MAPTP10636 758 aaKnown RBP16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 HSPA9P38646 679 aaKnown RBP16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 RAP1GAPP47736 663 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 MYL6P60660 151 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 CACNA2D3Q8IZS8 1091 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 ZNF473Q8WTR7 871 aaKnown RBP16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 SHC3Q92529 594 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 CLMNQ96JQ2 1002 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 FAM49AQ9H0Q0 323 aaPredicted RBP16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 PFASO15067 1338 aa16.33■□□□□ 0.2
TMEM55B-207ENST00000557041 RREB1Q92766 1687 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 SPDYE16A6NNV3 312 aaPredicted RBP16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 H0YCG3 227 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 CDH8P55286 799 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 VGLL4Q14135 290 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 SMAD1Q15797 465 aaKnown RBP16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 ZNF699Q32M78 642 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 C1orf220Q5T0J3 134 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 TDRD10Q5VZ19 366 aaKnown RBP16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 LMO3Q8TAP4 145 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 TMBIM4Q9HC24 238 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 SAMD15Q9P1V8 674 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 PODXLO00592 558 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 TNNC2P02585 160 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 KCNA2P16389 499 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 GLRA2P23416 452 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 TTC27Q6P3X3 843 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 SLC39A4Q6P5W5 647 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 ERICH1Q86X53 443 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 CEP57Q86XR8 500 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 SRRM1Q8IYB3 904 aaKnown RBP16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 HELQQ8TDG4 1101 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 COL24A1Q17RW2 1714 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 GMNCA6NCL1 334 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 IRF6O14896 467 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 P4HA2O15460 535 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 GKAP1Q5VSY0 366 aaPredicted RBP16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 C7orf31Q8N865 590 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 SAE1Q9UBE0 346 aaPredicted RBP16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 PARP2Q9UGN5 583 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 SYNPO2Q9UMS6 1093 aa16.32■□□□□ 0.2
TMEM55B-207ENST00000557041 C19orf81C9J6K1 198 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 PRKCBP05771 671 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 TXNP10599 105 aaKnown RBP16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 CHN1P15882 459 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 CUL2Q13617 745 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 TMED2Q15363 201 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 SLFN12LQ6IEE8 588 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 NIPA1Q7RTP0 329 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 TMEM130Q8N3G9 435 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 SEPT1Q8WYJ6 367 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 HSPH1Q92598 858 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 UBA1P22314 1058 aaKnown RBP16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 NCKAP1LP55160 1127 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 DHX34Q14147 1143 aaKnown RBP16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 PTGISQ16647 500 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 FAM133BQ5BKY9 247 aaKnown RBP16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 PNMA8AQ86V59 439 aaPredicted RBP16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 MPHOSPH6Q99547 160 aaKnown RBP16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 CCDC77Q9BR77 488 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 EPN3Q9H201 632 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 MRPL47Q9HD33 250 aaKnown RBP16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 UVRAGQ9P2Y5 699 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 SYNJ2BP-COX16A0A087WUM0 186 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 RGS20O76081 388 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 RPL7AP62424 266 aaKnown RBP16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 GPAT2Q6NUI2 795 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 CCDC13Q8IYE1 715 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 EMC1Q8N766 993 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 COX16Q9P0S2 106 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 NUB1Q9Y5A7 615 aa16.31■□□□□ 0.2
TMEM55B-207ENST00000557041 ZC3H4Q9UPT8 1303 aaKnown RBP16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 FAM187AA6NFU0 413 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 F5H423 210 aaPredicted RBP16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 PLA2G6O60733 806 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 STAM2O75886 525 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 CST3P01034 146 aaPredicted RBP16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 GZMAP12544 262 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 RPS12P25398 132 aaKnown RBP16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 ITGA8P53708 1063 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 WNT7BP56706 349 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 HSDL1Q3SXM5 330 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 MCOLN2Q8IZK6 566 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 IPO4Q8TEX9 1081 aaKnown RBP16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 ZNF516Q92618 1163 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 VTI1AQ96AJ9 217 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 PRMT1Q99873 361 aaKnown RBP16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 OSBPL8Q9BZF1 889 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 LRRC4CQ9HCJ2 640 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 UBR3Q6ZT12 1888 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 TTLL13PA6NNM8 815 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 MAFGO15525 162 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 ZSCAN5DPP0CG00 497 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 CLEC16AQ2KHT3 1053 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 DPY19L2P1Q6NXN4 242 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 CATSPERGQ6ZRH7 1159 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 MYCBPAPQ8TBZ2 947 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 NLRP7Q8WX94 980 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 KLRG1Q96E93 195 aa16.3■□□□□ 0.2
TMEM55B-207ENST00000557041 SAYSD1Q9NPB0 183 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms