RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 NOVP48745 357 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 RBM5P52756 815 aaKnown RBP eCLIP5.06□□□□□ -1.6
SRP54-212ENST00000556992 NLRP5P59047 1200 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 TGFB2P61812 414 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 GRM4Q14833 912 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 SURF1Q15526 300 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 ZRSR1Q15695 479 aaKnown RBP5.06□□□□□ -1.6
SRP54-212ENST00000556992 CAMK4Q16566 473 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 PFKFB3Q16875 520 aaPredicted RBP5.06□□□□□ -1.6
SRP54-212ENST00000556992 HS1BP3Q53T59 392 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 CCDC93Q567U6 631 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 DACT2Q5SW24 774 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 MROH9Q5TGP6 573 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 CDC42EP5Q6NZY7 148 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 TRMT10BQ6PF06 316 aaKnown RBP5.06□□□□□ -1.6
SRP54-212ENST00000556992 TEPPQ6URK8 271 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 OLFM4Q6UX06 510 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 RBM43Q6ZSC3 357 aaKnown RBP5.06□□□□□ -1.6
SRP54-212ENST00000556992 PLEKHH3Q7Z736 793 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 TRIM59Q8IWR1 403 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 ELOA2Q8IYF1 753 aaPredicted RBP5.06□□□□□ -1.6
SRP54-212ENST00000556992 CERS5Q8N5B7 392 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 SRBD1Q8N5C6 995 aaKnown RBP5.06□□□□□ -1.6
SRP54-212ENST00000556992 FSIP1Q8NA03 581 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 ENGASEQ8NFI3 743 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 MRGPRX3Q96LB0 322 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 TIGD1Q96MW7 591 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 AIFM3Q96NN9 605 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 GNRHR2Q96P88 292 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 PSMD1Q99460 953 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 APBA2Q99767 749 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 TMEM47Q9BQJ4 181 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 PHF20Q9BVI0 1012 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 IDI2Q9BXS1 227 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 NAT10Q9H0A0 1025 aaKnown RBP5.06□□□□□ -1.6
SRP54-212ENST00000556992 MEGF9Q9H1U4 602 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 NKX2-4Q9H2Z4 354 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 SLITRK6Q9H5Y7 841 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 CABP5Q9NP86 173 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 GJB4Q9NTQ9 266 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 DTLQ9NZJ0 730 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 PI4KBQ9UBF8 816 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 SERPINB13Q9UIV8 391 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 HOOK1Q9UJC3 728 aaKnown RBP5.06□□□□□ -1.6
SRP54-212ENST00000556992 NOL7Q9UMY1 257 aaKnown RBP5.06□□□□□ -1.6
SRP54-212ENST00000556992 STX8Q9UNK0 236 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 MORC2Q9Y6X9 1032 aaPredicted RBP5.06□□□□□ -1.6
SRP54-212ENST00000556992 WNK3Q9BYP7 1800 aa5.06□□□□□ -1.6
SRP54-212ENST00000556992 ROBO3Q96MS0 1386 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 MYO3BQ8WXR4 1341 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 AFDNP55196 1824 aaKnown RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 FAM237AA0A1B0GTK4 181 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 TCRBV5S2A0A599 114 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 KLRF2D3W0D1 207 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 NOP56O00567 594 aaKnown RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 MUSKO15146 869 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 PPIP5K2O43314 1243 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 ECE2O60344 883 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 ENTPD3O75355 529 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 WDHD1O75717 1129 aaPredicted RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 PLEKHA8P1O95397 391 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 LRG1P02750 347 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 PARP1P09874 1014 aaKnown RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 EPHB4P54760 987 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 GABPAQ06546 454 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 PICALMQ13492 652 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 PTPAQ15257 358 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 PKN3Q6P5Z2 889 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 RIOX2Q8IUF8 465 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 RCBTB1Q8NDN9 531 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 Q8TCH9 128 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 CCDC12Q8WUD4 166 aaPredicted RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 DIO2Q92813 273 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 FERMT2Q96AC1 680 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 GPRASP2Q96D09 838 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 RRP36Q96EU6 259 aaKnown RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 TOE1Q96GM8 510 aaKnown RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 TMEM169Q96HH4 297 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 CCDC34Q96HJ3 373 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 CLIC6Q96NY7 704 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 CDK5RAP1Q96SZ6 601 aaKnown RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 FUCA2Q9BTY2 467 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 PANK2Q9BZ23 570 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 OSBPL5Q9H0X9 879 aaPredicted RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 DBNDD1Q9H9R9 158 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 METTL5Q9NRN9 209 aaKnown RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 ANO10Q9NW15 660 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 MTMR4Q9NYA4 1195 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 PPP1R1BQ9UD71 204 aaPredicted RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 HDAC9Q9UKV0 1011 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 KCNJ14Q9UNX9 436 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 TCAF1Q9Y4C2 921 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 PCDHB4Q9Y5E5 795 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 SRPRBQ9Y5M8 271 aaKnown RBP5.05□□□□□ -1.6
SRP54-212ENST00000556992 X6R8D5 127 aa5.05□□□□□ -1.6
SRP54-212ENST00000556992 MYH14Q7Z406 1995 aaKnown RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 COL5A3P25940 1745 aaPredicted RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 TNS1Q9HBL0 1735 aaKnown RBP5.04□□□□□ -1.6
SRP54-212ENST00000556992 A0A1B0GVL5 298 aa5.04□□□□□ -1.6
SRP54-212ENST00000556992 PATE3B3GLJ2 98 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms