RNA–Protein interactions for RNA: ENST00000556975.5

TMEM260-214, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-214ENST00000556975 ASGR2P07307 311 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 ADRB2P07550 413 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 HNRNPA1P09651 372 aaKnown RBP eCLIP24.72■■□□□ 1.55
TMEM260-214ENST00000556975 CXCL8P10145 99 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 HOXA9P31269 272 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 OR1D2P34982 312 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 MATR3P43243 847 aaKnown RBP eCLIP24.72■■□□□ 1.55
TMEM260-214ENST00000556975 ZBTB6Q15916 424 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 UVSSAQ2YD98 709 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 RSPO2Q6UXX9 243 aaPredicted RBP24.72■■□□□ 1.55
TMEM260-214ENST00000556975 RTL10Q7L3V2 364 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 MAP4K3Q8IVH8 894 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 FBXL6Q8N531 539 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 TSPAN18Q96SJ8 248 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 ZHX3Q9H4I2 956 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 PIDD1Q9HB75 910 aa24.72■■□□□ 1.55
TMEM260-214ENST00000556975 A0A0B4J269 797 aa24.71■■□□□ 1.55
TMEM260-214ENST00000556975 I3L4J1 428 aa24.71■■□□□ 1.55
TMEM260-214ENST00000556975 SYN3O14994 580 aa24.71■■□□□ 1.55
TMEM260-214ENST00000556975 OGTO15294 1046 aa24.71■■□□□ 1.55
TMEM260-214ENST00000556975 N4BP1O75113 896 aaKnown RBP24.71■■□□□ 1.55
TMEM260-214ENST00000556975 PDIA4P13667 645 aaKnown RBP24.71■■□□□ 1.55
TMEM260-214ENST00000556975 NMT1P30419 496 aaKnown RBP24.71■■□□□ 1.55
TMEM260-214ENST00000556975 LIN9Q5TKA1 542 aa24.71■■□□□ 1.55
TMEM260-214ENST00000556975 CDY1Q9Y6F8 540 aa24.71■■□□□ 1.55
TMEM260-214ENST00000556975 POU2F2P09086 479 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 CYP3A5P20815 502 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 LRPAP1P30533 357 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 MRPL58Q14197 206 aaKnown RBP24.7■■□□□ 1.54
TMEM260-214ENST00000556975 SLC8B1Q6J4K2 584 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 SLC39A4Q6P5W5 647 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 CCDC73Q6ZRK6 1079 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 SV2BQ7L1I2 683 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 ZNF720Q7Z2F6 126 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 DDX12PQ92771 950 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 KCNK12Q9HB15 430 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP24.7■■□□□ 1.54
TMEM260-214ENST00000556975 IGSF9Q9P2J2 1179 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 EPS15L1Q9UBC2 864 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 NUB1Q9Y5A7 615 aa24.7■■□□□ 1.54
TMEM260-214ENST00000556975 TBC1D4O60343 1298 aa24.69■■□□□ 1.54
TMEM260-214ENST00000556975 C8AP07357 584 aa24.69■■□□□ 1.54
TMEM260-214ENST00000556975 TNFSF9P41273 254 aa24.69■■□□□ 1.54
TMEM260-214ENST00000556975 PPM1LQ5SGD2 360 aa24.69■■□□□ 1.54
TMEM260-214ENST00000556975 VARS2Q5ST30 1063 aaKnown RBP24.69■■□□□ 1.54
TMEM260-214ENST00000556975 AXDND1Q5T1B0 1012 aaPredicted RBP24.69■■□□□ 1.54
TMEM260-214ENST00000556975 DYMQ7RTS9 669 aa24.69■■□□□ 1.54
TMEM260-214ENST00000556975 SUGP1Q8IWZ8 645 aaKnown RBP24.69■■□□□ 1.54
TMEM260-214ENST00000556975 LINC00301Q8NCQ3 95 aa24.69■■□□□ 1.54
TMEM260-214ENST00000556975 DNAJC19Q96DA6 116 aa24.69■■□□□ 1.54
TMEM260-214ENST00000556975 SUSD3Q96L08 255 aa24.69■■□□□ 1.54
TMEM260-214ENST00000556975 SEL1LQ9UBV2 794 aa24.69■■□□□ 1.54
TMEM260-214ENST00000556975 STYXL1Q9Y6J8 313 aa24.69■■□□□ 1.54
TMEM260-214ENST00000556975 DOCK8Q8NF50 2099 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 MYMKA6NI61 221 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 GBP2P32456 591 aaPredicted RBP24.68■■□□□ 1.54
TMEM260-214ENST00000556975 NHLH1Q02575 133 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 PPP2R3AQ06190 1150 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 TDGQ13569 410 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 ENOX2Q16206 610 aaKnown RBP24.68■■□□□ 1.54
TMEM260-214ENST00000556975 ZC2HC1CQ53FD0 456 aaPredicted RBP24.68■■□□□ 1.54
TMEM260-214ENST00000556975 CD302Q8IX05 232 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 NXPE3Q969Y0 559 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 HVCN1Q96D96 273 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 MYADMQ96S97 322 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 MSTO1Q9BUK6 570 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 STRA6Q9BX79 667 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 RPF1Q9H9Y2 349 aaKnown RBP24.68■■□□□ 1.54
TMEM260-214ENST00000556975 TUBGCP4Q9UGJ1 667 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 CPSF3Q9UKF6 684 aaKnown RBP24.68■■□□□ 1.54
TMEM260-214ENST00000556975 UBQLN1Q9UMX0 589 aaKnown RBP24.68■■□□□ 1.54
TMEM260-214ENST00000556975 CACNA1HO95180 2353 aa24.68■■□□□ 1.54
TMEM260-214ENST00000556975 LACTBL1A8MY62 500 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 PPP6R2O75170 966 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 PPP1R37O75864 691 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 ZBTB41Q5SVQ8 909 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 SLFN12LQ6IEE8 588 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 SFR1Q86XK3 245 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 HSCBQ8IWL3 235 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 ZNF461Q8TAF7 563 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 KIF12Q96FN5 646 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 SMOC2Q9H3U7 446 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 DOCK6Q96HP0 2047 aa24.67■■□□□ 1.54
TMEM260-214ENST00000556975 ANKRD63C9JTQ0 380 aa24.66■■□□□ 1.54
TMEM260-214ENST00000556975 H7C4K7 107 aa24.66■■□□□ 1.54
TMEM260-214ENST00000556975 XPOTO43592 962 aaKnown RBP24.66■■□□□ 1.54
TMEM260-214ENST00000556975 XYLBO75191 536 aa24.66■■□□□ 1.54
TMEM260-214ENST00000556975 ABLIM3O94929 683 aa24.66■■□□□ 1.54
TMEM260-214ENST00000556975 GAP43P17677 238 aa24.66■■□□□ 1.54
TMEM260-214ENST00000556975 MCM4P33991 863 aa24.66■■□□□ 1.54
TMEM260-214ENST00000556975 POU5F1Q01860 360 aaKnown RBP24.66■■□□□ 1.54
TMEM260-214ENST00000556975 SPAG1Q07617 926 aa24.66■■□□□ 1.54
TMEM260-214ENST00000556975 STK38Q15208 465 aa24.66■■□□□ 1.54
TMEM260-214ENST00000556975 SLC7A14Q8TBB6 771 aa24.66■■□□□ 1.54
TMEM260-214ENST00000556975 ZNF396Q96N95 335 aaPredicted RBP24.66■■□□□ 1.54
TMEM260-214ENST00000556975 ZFP37Q9Y6Q3 630 aaPredicted RBP24.66■■□□□ 1.54
TMEM260-214ENST00000556975 A0A087X0B3 334 aa24.65■■□□□ 1.54
TMEM260-214ENST00000556975 SPTLC2O15270 562 aa24.65■■□□□ 1.54
TMEM260-214ENST00000556975 LAMP2P13473 410 aa24.65■■□□□ 1.54
TMEM260-214ENST00000556975 STAT6P42226 847 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms