RNA–Protein interactions for RNA: ENST00000556867.1

TDP1-216, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 748 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-216ENST00000556867 CRELD2Q6UXH1 353 aaPredicted RBP24.86■■□□□ 1.57
TDP1-216ENST00000556867 KRBA2Q6ZNG9 492 aa24.86■■□□□ 1.57
TDP1-216ENST00000556867 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP24.86■■□□□ 1.57
TDP1-216ENST00000556867 TUBGCP4Q9UGJ1 667 aa24.86■■□□□ 1.57
TDP1-216ENST00000556867 UBQLN1Q9UMX0 589 aaKnown RBP24.86■■□□□ 1.57
TDP1-216ENST00000556867 FAM50BQ9Y247 325 aa24.86■■□□□ 1.57
TDP1-216ENST00000556867 MBTPS2O43462 519 aa24.85■■□□□ 1.57
TDP1-216ENST00000556867 XPOTO43592 962 aaKnown RBP24.85■■□□□ 1.57
TDP1-216ENST00000556867 CYP3A5P20815 502 aa24.85■■□□□ 1.57
TDP1-216ENST00000556867 IGFBP6P24592 240 aaPredicted RBP24.85■■□□□ 1.57
TDP1-216ENST00000556867 CREMQ03060 361 aa24.85■■□□□ 1.57
TDP1-216ENST00000556867 SPAG1Q07617 926 aa24.85■■□□□ 1.57
TDP1-216ENST00000556867 RTP2Q5QGT7 225 aa24.85■■□□□ 1.57
TDP1-216ENST00000556867 FAM171A1Q5VUB5 890 aa24.85■■□□□ 1.57
TDP1-216ENST00000556867 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.85■■□□□ 1.57
TDP1-216ENST00000556867 RIN2Q8WYP3 895 aaPredicted RBP24.85■■□□□ 1.57
TDP1-216ENST00000556867 CBWD1Q9BRT8 395 aa24.85■■□□□ 1.57
TDP1-216ENST00000556867 TTPALQ9BTX7 342 aa24.85■■□□□ 1.57
TDP1-216ENST00000556867 ASB7Q9H672 318 aa24.85■■□□□ 1.57
TDP1-216ENST00000556867 DERAQ9Y315 318 aa24.85■■□□□ 1.57
TDP1-216ENST00000556867 GOLGA6L4A6NEF3 574 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 TEX28O15482 410 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 TRAPPC3O43617 180 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 ZNF202O95125 648 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 ADH1AP07327 375 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 IL9P15248 144 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 HOXB8P17481 243 aaPredicted RBP24.84■■□□□ 1.57
TDP1-216ENST00000556867 KLRC2P26717 231 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 LRPAP1P30533 357 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 CLCN4P51793 760 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 SCFD1Q8WVM8 642 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 PIK3R5Q8WYR1 880 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 FAM212AQ96EL1 285 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 EXOC1Q9NV70 894 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 DZANK1Q9NVP4 752 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 FNIP2Q9P278 1114 aa24.84■■□□□ 1.57
TDP1-216ENST00000556867 PLXNA3P51805 1871 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 KIAA0391O15091 583 aaKnown RBP24.83■■□□□ 1.57
TDP1-216ENST00000556867 LDHAP00338 332 aaKnown RBP24.83■■□□□ 1.57
TDP1-216ENST00000556867 EPCAMP16422 314 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 FGFR3P22607 806 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 BMT2Q1RMZ1 405 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 KMT5BQ4FZB7 885 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 JADE1Q6IE81 842 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 ARMCX5Q6P1M9 558 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 SYCE2Q6PIF2 218 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 SAAL1Q96ER3 474 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 UHRF1Q96T88 793 aaPredicted RBP24.83■■□□□ 1.57
TDP1-216ENST00000556867 FAM213AQ9BRX8 229 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 SLC39A2Q9NP94 309 aa24.83■■□□□ 1.57
TDP1-216ENST00000556867 EXTL3O43909 919 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 IL18RAPO95256 599 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 NFICP08651 508 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 BRCC3P46736 316 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 PSMD2Q13200 908 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 TMEM132DQ14C87 1099 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 SMAD2Q15796 467 aaKnown RBP24.82■■□□□ 1.56
TDP1-216ENST00000556867 SPATA1Q5VX52 437 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 PDXDC1Q6P996 788 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 CEP57Q86XR8 500 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 BRSK2Q8IWQ3 736 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 FMR1NBQ8N0W7 255 aaPredicted RBP24.82■■□□□ 1.56
TDP1-216ENST00000556867 ZSWIM2Q8NEG5 633 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 S1PR5Q9H228 398 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 CHMP5Q9NZZ3 219 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 C2CD2Q9Y426 696 aa24.82■■□□□ 1.56
TDP1-216ENST00000556867 DLL1O00548 723 aa24.81■■□□□ 1.56
TDP1-216ENST00000556867 C1RP00736 705 aa24.81■■□□□ 1.56
TDP1-216ENST00000556867 PRR29P0C7W0 189 aa24.81■■□□□ 1.56
TDP1-216ENST00000556867 SNRPFP62306 86 aaKnown RBP24.81■■□□□ 1.56
TDP1-216ENST00000556867 DPYDQ12882 1025 aa24.81■■□□□ 1.56
TDP1-216ENST00000556867 PRSS55Q6UWB4 352 aaPredicted RBP24.81■■□□□ 1.56
TDP1-216ENST00000556867 KIAA0895Q8NCT3 520 aa24.81■■□□□ 1.56
TDP1-216ENST00000556867 BEST2Q8NFU1 509 aa24.81■■□□□ 1.56
TDP1-216ENST00000556867 LNX1Q8TBB1 728 aaPredicted RBP24.81■■□□□ 1.56
TDP1-216ENST00000556867 NECAB3Q96P71 396 aaPredicted RBP24.81■■□□□ 1.56
TDP1-216ENST00000556867 USP15Q9Y4E8 981 aaPredicted RBP24.81■■□□□ 1.56
TDP1-216ENST00000556867 NUB1Q9Y5A7 615 aa24.81■■□□□ 1.56
TDP1-216ENST00000556867 MTCL1Q9Y4B5 1905 aaKnown RBP24.8■■□□□ 1.56
TDP1-216ENST00000556867 I3L4J1 428 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 TGFB1I1O43294 461 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 RPN1P04843 607 aaKnown RBP24.8■■□□□ 1.56
TDP1-216ENST00000556867 TKTP29401 623 aaKnown RBP24.8■■□□□ 1.56
TDP1-216ENST00000556867 STK4Q13043 487 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 PSMD5Q16401 504 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 KANK3Q6NY19 840 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 NT5DC4Q86YG4 428 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 NELFCDQ8IXH7 590 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 GPD1LQ8N335 351 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 TMEM130Q8N3G9 435 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 SUSD6Q92537 303 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 CCDC34Q96HJ3 373 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 SUSD3Q96L08 255 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 FBXL18Q96ME1 805 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 PCIF1Q9H4Z3 704 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 AGPAT3Q9NRZ7 376 aa24.8■■□□□ 1.56
TDP1-216ENST00000556867 RBAKQ9NYW8 714 aaPredicted RBP24.8■■□□□ 1.56
TDP1-216ENST00000556867 GOLGA8IPA6NC78 632 aa24.79■■□□□ 1.56
TDP1-216ENST00000556867 GOLGA8JA6NMD2 632 aa24.79■■□□□ 1.56
TDP1-216ENST00000556867 SYN3O14994 580 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms