RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 PPEF2O14830 753 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 ADAM12O43184 909 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 ACTN4O43707 911 aaKnown RBP11.29□□□□□ -0.6
SNX6-208ENST00000556712 NFICP08651 508 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 ABCD1P33897 745 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 WNT7BP56706 349 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 CBX2Q14781 532 aaPredicted RBP11.29□□□□□ -0.6
SNX6-208ENST00000556712 PSMD5Q16401 504 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 JADE1Q6IE81 842 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 DCLRE1AQ6PJP8 1040 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 TMC5Q6UXY8 1006 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.29□□□□□ -0.6
SNX6-208ENST00000556712 PALB2Q86YC2 1186 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 ADHFE1Q8IWW8 467 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 LNX1Q8TBB1 728 aaPredicted RBP11.29□□□□□ -0.6
SNX6-208ENST00000556712 NOC3LQ8WTT2 800 aaKnown RBP11.29□□□□□ -0.6
SNX6-208ENST00000556712 PIK3R5Q8WYR1 880 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
SNX6-208ENST00000556712 C7orf25Q9BPX7 421 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 GOLPH3LQ9H4A5 285 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 MAGEF1Q9HAY2 307 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 RXFP1Q9HBX9 757 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 DZANK1Q9NVP4 752 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 AGO2Q9UKV8 859 aaKnown RBP11.29□□□□□ -0.6
SNX6-208ENST00000556712 HPSEQ9Y251 543 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 SSX2IPQ9Y2D8 614 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 ATP6V1DQ9Y5K8 247 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 STYXL1Q9Y6J8 313 aa11.29□□□□□ -0.6
SNX6-208ENST00000556712 GOLGA8IPA6NC78 632 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 GOLGA8JA6NMD2 632 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 TULP1O00294 542 aaPredicted RBP11.28□□□□□ -0.6
SNX6-208ENST00000556712 TGM5O43548 720 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 RFPL2O75678 378 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 GLUD1P00367 558 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 PRR29P0C7W0 189 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 HOXB8P17481 243 aaPredicted RBP11.28□□□□□ -0.6
SNX6-208ENST00000556712 CMA1P23946 247 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 MCM4P33991 863 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 NDUFA8P51970 172 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 AMPD3Q01432 767 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 KYAT1Q16773 422 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 FAM26FQ5R3K3 315 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 CRELD2Q6UXH1 353 aaPredicted RBP11.28□□□□□ -0.6
SNX6-208ENST00000556712 UNC13DQ70J99 1090 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 PPFIBP1Q86W92 1011 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 CEP57L1Q8IYX8 460 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 SYCP3Q8IZU3 236 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 FSIP1Q8NA03 581 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 FAM84AQ96KN4 292 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 RPGRIP1Q96KN7 1286 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 CLSTN3Q9BQT9 956 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 CBWD1Q9BRT8 395 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 FAM213AQ9BRX8 229 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 LRRC27Q9C0I9 530 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 PCIF1Q9H4Z3 704 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 POMKQ9H5K3 350 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 SFXN1Q9H9B4 322 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 PLEKHA5Q9HAU0 1116 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 PRKAG3Q9UGI9 489 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 EXOC7Q9UPT5 735 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 NUB1Q9Y5A7 615 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 PCDHB13Q9Y5F0 798 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 SCN1AP35498 2009 aa11.28□□□□□ -0.6
SNX6-208ENST00000556712 C19orf67A6NJJ6 358 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 FGFR3P22607 806 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 HOXD13P35453 343 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 EHHADHQ08426 723 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 ELAVL2Q12926 359 aaKnown RBP11.27□□□□□ -0.61
SNX6-208ENST00000556712 ALCAMQ13740 583 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 ZBTB6Q15916 424 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 SLFN12LQ6IEE8 588 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 CNNM4Q6P4Q7 775 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 RSPO2Q6UXX9 243 aaPredicted RBP11.27□□□□□ -0.61
SNX6-208ENST00000556712 NELFCDQ8IXH7 590 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 EFCAB13Q8IY85 973 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 PAGE5Q96GU1 130 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 PHF7Q9BWX1 381 aaPredicted RBP11.27□□□□□ -0.61
SNX6-208ENST00000556712 SCAND2PQ9GZW5 306 aaPredicted RBP11.27□□□□□ -0.61
SNX6-208ENST00000556712 ADAM7Q9H2U9 754 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 SLC39A2Q9NP94 309 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.27□□□□□ -0.61
SNX6-208ENST00000556712 FNIP2Q9P278 1114 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 MTRRQ9UBK8 725 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 UBQLN1Q9UMX0 589 aaKnown RBP11.27□□□□□ -0.61
SNX6-208ENST00000556712 CDY1Q9Y6F8 540 aa11.27□□□□□ -0.61
SNX6-208ENST00000556712 LOC730098B7Z3J9 87 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 TRAPPC3O43617 180 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 KLRC4O43908 158 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 ADRB2P07550 413 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 SLFN14P0C7P3 912 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 LRPAP1P30533 357 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 RPL9P32969 192 aaKnown RBP11.26□□□□□ -0.61
SNX6-208ENST00000556712 OR1D2P34982 312 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 SYKP43405 635 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 CREMQ03060 361 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 ITIH3Q06033 890 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 TMEM132DQ14C87 1099 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 VARS2Q5ST30 1063 aaKnown RBP11.26□□□□□ -0.61
SNX6-208ENST00000556712 SPATA1Q5VX52 437 aa11.26□□□□□ -0.61
SNX6-208ENST00000556712 CES5AQ6NT32 575 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms