RNA–Protein interactions for RNA: ENST00000556517.1

ABCD4-225, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 947 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-225ENST00000556517 GAS2L3Q86XJ1 694 aa13.51□□□□□ -0.25
ABCD4-225ENST00000556517 GSTCDQ8NEC7 633 aa13.51□□□□□ -0.25
ABCD4-225ENST00000556517 OR5B17Q8NGF7 314 aa13.51□□□□□ -0.25
ABCD4-225ENST00000556517 PLEKHO2Q8TD55 490 aa13.51□□□□□ -0.25
ABCD4-225ENST00000556517 C18orf25Q96B23 403 aaPredicted RBP13.51□□□□□ -0.25
ABCD4-225ENST00000556517 ZNF689Q96CS4 500 aaPredicted RBP13.51□□□□□ -0.25
ABCD4-225ENST00000556517 DDX27Q96GQ7 796 aaKnown RBP13.51□□□□□ -0.25
ABCD4-225ENST00000556517 RBSNQ9H1K0 784 aa13.51□□□□□ -0.25
ABCD4-225ENST00000556517 VPS16Q9H269 839 aa13.51□□□□□ -0.25
ABCD4-225ENST00000556517 HSD3B7Q9H2F3 369 aa13.51□□□□□ -0.25
ABCD4-225ENST00000556517 LIMA1Q9UHB6 759 aaKnown RBP13.51□□□□□ -0.25
ABCD4-225ENST00000556517 PLAGL2Q9UPG8 496 aa13.51□□□□□ -0.25
ABCD4-225ENST00000556517 RALGAPA2Q2PPJ7 1873 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.5□□□□□ -0.25
ABCD4-225ENST00000556517 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.5□□□□□ -0.25
ABCD4-225ENST00000556517 CASTOR2A6NHX0 329 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 P4HA2O15460 535 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 LAG3P18627 525 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 PNPLA4P41247 253 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 OR1G1P47890 313 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 COPB1P53618 953 aaKnown RBP13.5□□□□□ -0.25
ABCD4-225ENST00000556517 RBP5P82980 135 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 PPP3CAQ08209 521 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 ZBTB6Q15916 424 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 TDRD10Q5VZ19 366 aaKnown RBP13.5□□□□□ -0.25
ABCD4-225ENST00000556517 SV2AQ7L0J3 742 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 FBXL13Q8NEE6 735 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 ZNF560Q96MR9 790 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 TMEM175Q9BSA9 504 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 CXCL16Q9H2A7 254 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 RC3H2Q9HBD1 1191 aaKnown RBP13.5□□□□□ -0.25
ABCD4-225ENST00000556517 MSRAQ9UJ68 235 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 RWDD3Q9Y3V2 267 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 PCDHA11Q9Y5I1 949 aa13.5□□□□□ -0.25
ABCD4-225ENST00000556517 A0A1W2PPC1 479 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 GOLGA6L3A6NEY3 463 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 LGALS16A8MUM7 142 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 PODXLO00592 558 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 CBFA2T2O43439 604 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 ALDH2P05091 517 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 PAX3P23760 479 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 LRPAP1P30533 357 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 POLR2BP30876 1174 aaKnown RBP13.49□□□□□ -0.25
ABCD4-225ENST00000556517 MCCD1P59942 119 aaPredicted RBP13.49□□□□□ -0.25
ABCD4-225ENST00000556517 FANCCQ00597 558 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 UBXN1Q04323 297 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 DSC1Q08554 894 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 NCOA4Q13772 614 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 NAB2Q15742 525 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 RAB30Q15771 203 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 ZACNQ401N2 412 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 SV2CQ496J9 727 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 CBWD6Q4V339 395 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 WDR44Q5JSH3 913 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 CBWD3Q5JTY5 395 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 CBWD5Q5RIA9 395 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 C1orf220Q5T0J3 134 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 ZNF280BQ86YH2 543 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 COLGALT2Q8IYK4 626 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 LRRC52Q8N7C0 313 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 C1orf127Q8N9H9 656 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 ZNF516Q92618 1163 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 ZNF558Q96NG5 402 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 COLEC11Q9BWP8 271 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 GOLGA2P5Q9HBQ8 144 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 MIOSQ9NXC5 875 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 GCNT4Q9P109 453 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 AGAP1Q9UPQ3 857 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 NUB1Q9Y5A7 615 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 PCDHB12Q9Y5F1 795 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 TTC3P53804 2025 aa13.49□□□□□ -0.25
ABCD4-225ENST00000556517 COL4A6Q14031 1691 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 GTPBP10A4D1E9 387 aaKnown RBP13.48□□□□□ -0.25
ABCD4-225ENST00000556517 LRRC10BA6NIK2 292 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 PMM2O15305 246 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 TRAPPC3O43617 180 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 B3GAT3O94766 335 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 DDHD2O94830 711 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 C4BPAP04003 597 aaKnown RBP13.48□□□□□ -0.25
ABCD4-225ENST00000556517 P4HA1P13674 534 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 ATICP31939 592 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 PPM1AP35813 382 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 CLCNKBP51801 687 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 GUCY2FP51841 1108 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 RABGGTBP53611 331 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 BCAR1P56945 870 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 UBASH3AP57075 661 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 SOX4Q06945 474 aaPredicted RBP13.48□□□□□ -0.25
ABCD4-225ENST00000556517 UPP1Q16831 310 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 SGSM1Q2NKQ1 1148 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 ZNF699Q32M78 642 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 MIIPQ5JXC2 388 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 C9orf57Q5W0N0 161 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 DCLRE1AQ6PJP8 1040 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 GBP6Q6ZN66 633 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 SP7Q8TDD2 431 aaPredicted RBP13.48□□□□□ -0.25
ABCD4-225ENST00000556517 TAF4BQ92750 862 aa13.48□□□□□ -0.25
ABCD4-225ENST00000556517 PCMTD1Q96MG8 357 aaPredicted RBP13.48□□□□□ -0.25
ABCD4-225ENST00000556517 NRDE2Q9H7Z3 1164 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms