RNA–Protein interactions for RNA: ENST00000556462.1

LINC01550-206, Transcript of long intergenic non-protein coding RNA 1550, humanhuman

TSL 2 BASIC

Gene LINC01550, Length 2,098 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01550-206ENST00000556462 TMEM130Q8N3G9 435 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 C1orf127Q8N9H9 656 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 ARID3AQ99856 593 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 TRIM6Q9C030 488 aaPredicted RBP11.66□□□□□ -0.54
LINC01550-206ENST00000556462 XYLT2Q9H1B5 865 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 RNF39Q9H2S5 420 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 SIX4Q9UIU6 781 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 C2CD2Q9Y426 696 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 NUB1Q9Y5A7 615 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 ANK1P16157 1881 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 RCCD1A6NED2 376 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 GOLGA6L9A6NEM1 432 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 TNNC2P02585 160 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 CKBP12277 381 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 ARHGAP25P42331 645 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 NOP14P78316 857 aaKnown RBP11.66□□□□□ -0.54
LINC01550-206ENST00000556462 PTPN14Q15678 1187 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 ZBTB6Q15916 424 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 SLC18A3Q16572 532 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 SGSM1Q2NKQ1 1148 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 TRAF7Q6Q0C0 670 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 ENOSF1Q7L5Y1 443 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 FMNL3Q8IVF7 1028 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 SMG8Q8ND04 991 aaKnown RBP11.66□□□□□ -0.54
LINC01550-206ENST00000556462 SNX27Q96L92 541 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 ZMAT2Q96NC0 199 aaKnown RBP11.66□□□□□ -0.54
LINC01550-206ENST00000556462 CHST12Q9NRB3 414 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 C1orf112Q9NSG2 853 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 PADI3Q9ULW8 664 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 TFR2Q9UP52 801 aa11.66□□□□□ -0.54
LINC01550-206ENST00000556462 UMODL1Q5DID0 1318 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 GPR182O15218 404 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 RECQL4O94761 1208 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 AKAP5P24588 427 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 LPIN1Q14693 890 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 TWF2Q6IBS0 349 aaKnown RBP11.65□□□□□ -0.54
LINC01550-206ENST00000556462 ZNF662Q6ZS27 426 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 NT5DC4Q86YG4 428 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 FAM81BQ96LP2 452 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 ERVK-5Q9HDB9 667 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 LZTFL1Q9NQ48 299 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 IPPQ9Y573 584 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 PCDHA13Q9Y5I0 950 aa11.65□□□□□ -0.54
LINC01550-206ENST00000556462 CYP26A1O43174 497 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 CAND2O75155 1236 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 CCDC172P0C7W6 258 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 GHRP10912 638 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 HSPA8P11142 646 aaKnown RBP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 TNNT1P13805 278 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 ACO1P21399 889 aaKnown RBP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 CD52P31358 61 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 MNX1P50219 401 aaPredicted RBP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 YARSP54577 528 aaKnown RBP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 TRPC3Q13507 836 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 CUL2Q13617 745 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 TMEM132DQ14C87 1099 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 SPA17Q15506 151 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 XKR4Q5GH76 650 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 SLC30A5Q8TAD4 765 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 JAKMIP2Q96AA8 810 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 LACRTQ9GZZ8 138 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 ACP6Q9NPH0 428 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 CNTN3Q9P232 1028 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 SQORQ9Y6N5 450 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 MKI67P46013 3256 aaKnown RBP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 DDX3XO00571 662 aaKnown RBP eCLIP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 IPO7O95373 1038 aaKnown RBP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 SGPL1O95470 568 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 ITGB3P05106 788 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 ANXA13P27216 316 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 USP8P40818 1118 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 GUCY2FP51841 1108 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 VAV2P52735 878 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 BMS1Q14692 1282 aaKnown RBP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 CTU1Q7Z7A3 348 aaKnown RBP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 FAM126BQ8IXS8 530 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 KIF12Q96FN5 646 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 ZNF333Q96JL9 665 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 APOL6Q9BWW8 343 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 SEZ6LQ9BYH1 1024 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 IFIH1Q9BYX4 1025 aaKnown RBP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 IRX2Q9BZI1 471 aaPredicted RBP11.64□□□□□ -0.55
LINC01550-206ENST00000556462 IMPG2Q9BZV3 1241 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 CRISPLD2Q9H0B8 497 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 TRIM10Q9UDY6 481 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 NENFQ9UMX5 172 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 DERAQ9Y315 318 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 PCDHB2Q9Y5E7 798 aa11.64□□□□□ -0.55
LINC01550-206ENST00000556462 MGEA5O60502 916 aa11.63□□□□□ -0.55
LINC01550-206ENST00000556462 OFD1O75665 1012 aa11.63□□□□□ -0.55
LINC01550-206ENST00000556462 CD4P01730 458 aa11.63□□□□□ -0.55
LINC01550-206ENST00000556462 KRT19P08727 400 aa11.63□□□□□ -0.55
LINC01550-206ENST00000556462 TBXAS1P24557 533 aaPredicted RBP11.63□□□□□ -0.55
LINC01550-206ENST00000556462 MAGEA1P43355 309 aa11.63□□□□□ -0.55
LINC01550-206ENST00000556462 ETF1P62495 437 aaKnown RBP11.63□□□□□ -0.55
LINC01550-206ENST00000556462 DSC3Q14574 896 aa11.63□□□□□ -0.55
LINC01550-206ENST00000556462 MBTPS1Q14703 1052 aa11.63□□□□□ -0.55
LINC01550-206ENST00000556462 DNTTIP2Q5QJE6 756 aaKnown RBP11.63□□□□□ -0.55
LINC01550-206ENST00000556462 FBXO46Q6PJ61 603 aaPredicted RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms