RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 SSX2IPQ9Y2D8 614 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 STYXL1Q9Y6J8 313 aa8.84□□□□□ -0.99
VTI1B-206ENST00000556461 VWA8A3KMH1 1905 aa8.84□□□□□ -1
VTI1B-206ENST00000556461 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.83□□□□□ -1
VTI1B-206ENST00000556461 DCXO43602 365 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 GCNT3O95395 438 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 ADRB2P07550 413 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 NFICP08651 508 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 PDIA4P13667 645 aaKnown RBP8.83□□□□□ -1
VTI1B-206ENST00000556461 SCP2P22307 547 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 RPL9P32969 192 aaKnown RBP8.83□□□□□ -1
VTI1B-206ENST00000556461 HOXD13P35453 343 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 MTHFRP42898 656 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 L1TD1Q5T7N2 865 aaKnown RBP8.83□□□□□ -1
VTI1B-206ENST00000556461 SCARA3Q6AZY7 606 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 ADALQ6DHV7 355 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 CES5AQ6NT32 575 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 GPR65Q8IYL9 337 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 KREMEN2Q8NCW0 462 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 LEO1Q8WVC0 666 aaPredicted RBP8.83□□□□□ -1
VTI1B-206ENST00000556461 FAM212AQ96EL1 285 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 KIF12Q96FN5 646 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 DDX27Q96GQ7 796 aaKnown RBP8.83□□□□□ -1
VTI1B-206ENST00000556461 POP1Q99575 1024 aaKnown RBP8.83□□□□□ -1
VTI1B-206ENST00000556461 LRFN3Q9BTN0 628 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 TRIM9Q9C026 710 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 BLZF1Q9H2G9 400 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 TNMDQ9H2S6 317 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 RPF1Q9H9Y2 349 aaKnown RBP8.83□□□□□ -1
VTI1B-206ENST00000556461 PLEKHA5Q9HAU0 1116 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 OLFML3Q9NRN5 406 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.83□□□□□ -15e-7■■■■□ 24.2
VTI1B-206ENST00000556461 SLC38A7Q9NVC3 462 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 SEL1LQ9UBV2 794 aa8.83□□□□□ -1
VTI1B-206ENST00000556461 AGO2Q9UKV8 859 aaKnown RBP8.83□□□□□ -1
VTI1B-206ENST00000556461 CITO14578 2027 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 CCDC195A0A1B0GUA6 201 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 A0A1B0GVL5 298 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 TBC1D4O60343 1298 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 LRPAP1P30533 357 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 OR1D2P34982 312 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 PPP2R3AQ06190 1150 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 ELAVL2Q12926 359 aaKnown RBP8.82□□□□□ -1
VTI1B-206ENST00000556461 CUL4BQ13620 913 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 ATAT1Q5SQI0 421 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 VARS2Q5ST30 1063 aaKnown RBP8.82□□□□□ -1
VTI1B-206ENST00000556461 ATL3Q6DD88 541 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 JADE1Q6IE81 842 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 EFCAB13Q8IY85 973 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 IQUBQ8NA54 791 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 CMASQ8NFW8 434 aaPredicted RBP8.82□□□□□ -1
VTI1B-206ENST00000556461 POMGNT1Q8WZA1 660 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 HVCN1Q96D96 273 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 SAAL1Q96ER3 474 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 RIPOR3Q96MK2 946 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 NECTIN4Q96NY8 510 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 ACCSQ96QU6 501 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 C7orf25Q9BPX7 421 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 CBWD1Q9BRT8 395 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 SMOC2Q9H3U7 446 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 MTRRQ9UBK8 725 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 SERTAD1Q9UHV2 236 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 FBXW11Q9UKB1 542 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 CFAP45Q9UL16 551 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 CDY1Q9Y6F8 540 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 TECTAO75443 2155 aa8.82□□□□□ -1
VTI1B-206ENST00000556461 WDFY4Q6ZS81 3184 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 GOLGA8IPA6NC78 632 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 SPDYE4A6NLX3 237 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 GOLGA8JA6NMD2 632 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 SPTLC1O15269 473 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 ACTN4O43707 911 aaKnown RBP8.81□□□□□ -1
VTI1B-206ENST00000556461 GPR37L1O60883 481 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 N4BP1O75113 896 aaKnown RBP8.81□□□□□ -1
VTI1B-206ENST00000556461 PAPLNO95428 1278 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 ASGR2P07307 311 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 ALADP13716 330 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 PFKFB1P16118 471 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 MCM4P33991 863 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 AFMP43652 599 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 AARSP49588 968 aaKnown RBP eCLIP8.81□□□□□ -1
VTI1B-206ENST00000556461 ASIC1P78348 528 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 NTHL1P78549 312 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 CREMQ03060 361 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 EHHADHQ08426 723 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 RAB33AQ14088 237 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 MRPL58Q14197 206 aaKnown RBP8.81□□□□□ -1
VTI1B-206ENST00000556461 SPATA1Q5VX52 437 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 SLFN12LQ6IEE8 588 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 CNNM4Q6P4Q7 775 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 EPM2AIP1Q7L775 607 aaPredicted RBP8.81□□□□□ -1
VTI1B-206ENST00000556461 CCDC65Q8IXS2 484 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 SMG7Q92540 1137 aaKnown RBP8.81□□□□□ -1
VTI1B-206ENST00000556461 SUSD3Q96L08 255 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 FAM213AQ9BRX8 229 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 C1QTNF1Q9BXJ1 281 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 CUEDC2Q9H467 287 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 PLEKHA4Q9H4M7 779 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 PCIF1Q9H4Z3 704 aa8.81□□□□□ -1
VTI1B-206ENST00000556461 GDPD2Q9HCC8 539 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms