RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 RTL10Q7L3V2 364 aa24.69■■□□□ 1.54
ACTN1-220ENST00000556433 ITFG1Q8TB96 612 aa24.69■■□□□ 1.54
ACTN1-220ENST00000556433 TBC1D32Q96NH3 1257 aa24.69■■□□□ 1.54
ACTN1-220ENST00000556433 H0YCG3 227 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 POU2F2P09086 479 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 RFX1P22670 979 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 MCL1Q07820 350 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 DHX8Q14562 1220 aaKnown RBP24.68■■□□□ 1.54
ACTN1-220ENST00000556433 PARM1Q6UWI2 310 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 HAUS6Q7Z4H7 955 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 ZNF461Q8TAF7 563 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 GPR152Q8TDT2 470 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 FGF13Q92913 245 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 BICD1Q96G01 975 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 RPP25Q9BUL9 199 aaKnown RBP24.68■■□□□ 1.54
ACTN1-220ENST00000556433 HCFC1R1Q9NWW0 138 aa24.68■■□□□ 1.54
ACTN1-220ENST00000556433 DNMT3BQ9UBC3 853 aaKnown RBP24.68■■□□□ 1.54
ACTN1-220ENST00000556433 H7C4K7 107 aa24.67■■□□□ 1.54
ACTN1-220ENST00000556433 SYN3O14994 580 aa24.67■■□□□ 1.54
ACTN1-220ENST00000556433 ELF1P32519 619 aa24.67■■□□□ 1.54
ACTN1-220ENST00000556433 NCKAP1LP55160 1127 aa24.67■■□□□ 1.54
ACTN1-220ENST00000556433 ARPP19P56211 112 aa24.67■■□□□ 1.54
ACTN1-220ENST00000556433 ROR1Q01973 937 aa24.67■■□□□ 1.54
ACTN1-220ENST00000556433 SLC8B1Q6J4K2 584 aa24.67■■□□□ 1.54
ACTN1-220ENST00000556433 GPBP1Q86WP2 473 aa24.67■■□□□ 1.54
ACTN1-220ENST00000556433 ODF2LQ9ULJ1 636 aa24.67■■□□□ 1.54
ACTN1-220ENST00000556433 GFRA3O60609 400 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 BMP15O95972 392 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 PABPC1LQ4VXU2 614 aaKnown RBP24.66■■□□□ 1.54
ACTN1-220ENST00000556433 BRAPQ7Z569 592 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 CCDC105Q8IYK2 499 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 MYCT1Q8N699 235 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 DTWD2Q8NBA8 298 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 FGF14Q92915 247 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 REEP2Q9BRK0 252 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 HAPLN2Q9GZV7 340 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 SLC2A4RGQ9NR83 387 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 KCNH3Q9ULD8 1083 aa24.66■■□□□ 1.54
ACTN1-220ENST00000556433 TBC1D4O60343 1298 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 ABLIM3O94929 683 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 CLTAP09496 248 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 CXCL8P10145 99 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 MCM4P33991 863 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 LONP1P36776 959 aaKnown RBP24.65■■□□□ 1.54
ACTN1-220ENST00000556433 GRIN1Q05586 938 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 SPAG1Q07617 926 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 MRPL58Q14197 206 aaKnown RBP24.65■■□□□ 1.54
ACTN1-220ENST00000556433 SF3A1Q15459 793 aaKnown RBP24.65■■□□□ 1.54
ACTN1-220ENST00000556433 MTSS1LQ765P7 747 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 RASSF8Q8NHQ8 419 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 LRRC15Q8TF66 581 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 SUSD3Q96L08 255 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 TBC1D17Q9HA65 648 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 PLEKHA5Q9HAU0 1116 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 BLOC1S4Q9NUP1 217 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 TUBGCP4Q9UGJ1 667 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 FBXL5Q9UKA1 691 aa24.65■■□□□ 1.54
ACTN1-220ENST00000556433 WDR27A2RRH5 827 aa24.64■■□□□ 1.54
ACTN1-220ENST00000556433 PROB1E7EW31 1015 aa24.64■■□□□ 1.54
ACTN1-220ENST00000556433 PRRG1O14668 218 aa24.64■■□□□ 1.54
ACTN1-220ENST00000556433 FAM13AO94988 1023 aa24.64■■□□□ 1.54
ACTN1-220ENST00000556433 KRT18P05783 430 aaKnown RBP24.64■■□□□ 1.54
ACTN1-220ENST00000556433 LIG4P49917 911 aa24.64■■□□□ 1.54
ACTN1-220ENST00000556433 GPC5P78333 572 aa24.64■■□□□ 1.54
ACTN1-220ENST00000556433 MCM6Q14566 821 aa24.64■■□□□ 1.54
ACTN1-220ENST00000556433 KARSQ15046 597 aaKnown RBP24.64■■□□□ 1.54
ACTN1-220ENST00000556433 CTXN3Q4LDR2 81 aa24.64■■□□□ 1.54
ACTN1-220ENST00000556433 ARHGEF3Q9NR81 526 aa24.64■■□□□ 1.54
ACTN1-220ENST00000556433 TBX20Q9UMR3 447 aa24.64■■□□□ 1.54
ACTN1-220ENST00000556433 MRPS23Q9Y3D9 190 aaKnown RBP24.64■■□□□ 1.54
ACTN1-220ENST00000556433 CITO14578 2027 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 ARHGEF37A1IGU5 675 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 LRG1P02750 347 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 ATF2P15336 505 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 PLCG1P19174 1290 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 MARCKSP29966 332 aaPredicted RBP24.63■■□□□ 1.53
ACTN1-220ENST00000556433 APPL2Q8NEU8 664 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 ING5Q8WYH8 240 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 RAD54LQ92698 747 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 DDX12PQ92771 950 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 KCNN1Q92952 543 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 KIF12Q96FN5 646 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 ZHX3Q9H4I2 956 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 PARVGQ9HBI0 331 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 CYP4F11Q9HBI6 524 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 MYH11P35749 1972 aa24.63■■□□□ 1.53
ACTN1-220ENST00000556433 ZFHX2Q9C0A1 2572 aaPredicted RBP24.62■■□□□ 1.53
ACTN1-220ENST00000556433 TTC26A0AVF1 554 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 K7ENM7 598 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 RHOP08100 348 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 PTPN2P17706 415 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 NBL1P41271 181 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 TNFSF9P41273 254 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 KYAT1Q16773 422 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 PHLDB3Q6NSJ2 640 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 NPAS3Q8IXF0 933 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 TMEM130Q8N3G9 435 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 PCDHB8Q9UN66 801 aa24.62■■□□□ 1.53
ACTN1-220ENST00000556433 VPS37CA5D8V6 355 aaPredicted RBP24.61■■□□□ 1.53
ACTN1-220ENST00000556433 HNRNPDLO14979 420 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms