RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 STK3Q13188 491 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 LRRC32Q14392 662 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 NAB2Q15742 525 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 PRSS36Q5K4E3 855 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 VITQ6UXI7 678 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 PPP4R3CPQ6ZMV5 832 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 YAF2Q8IY57 180 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 FAM177A1Q8N128 213 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-219ENST00000556432 SPEM1Q8N4L4 309 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 FAM160A2Q8N612 972 aaPredicted RBP15.36■□□□□ 0.05
ACTN1-219ENST00000556432 FAM200AQ8TCP9 573 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 RBM12Q9NTZ6 932 aaKnown RBP15.36■□□□□ 0.05
ACTN1-219ENST00000556432 TICRRQ7Z2Z1 1910 aa15.36■□□□□ 0.05
ACTN1-219ENST00000556432 A0A087WWV3 80 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 ARHGEF37A1IGU5 675 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 TTLL13PA6NNM8 815 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 PRKCBP05771 671 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 CHRNB1P11230 501 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 MYL4P12829 197 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 BRCC3P46736 316 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 RARRES1P49788 294 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 COL9A2Q14055 689 aaPredicted RBP15.35■□□□□ 0.05
ACTN1-219ENST00000556432 SF3A2Q15428 464 aaKnown RBP15.35■□□□□ 0.05
ACTN1-219ENST00000556432 CCDC6Q16204 474 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 MAPK6Q16659 721 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 IQCEQ6IPM2 695 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 MAP4K3Q8IVH8 894 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 ZNF461Q8TAF7 563 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 DEPDC1BQ8WUY9 529 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 ZSWIM3Q96MP5 696 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 UROC1Q96N76 676 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 C2orf40Q9H1Z8 148 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 GOLGA2P5Q9HBQ8 144 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 USP20Q9Y2K6 914 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 SDK1Q7Z5N4 2213 aa15.35■□□□□ 0.05
ACTN1-219ENST00000556432 SLC38A8A6NNN8 435 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 TMEM189-UBE2V1I3L0A0 370 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 NRG2O14511 850 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-219ENST00000556432 AXIN1O15169 862 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 LYPLA2O95372 231 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 XBP1P17861 261 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 CCR2P41597 374 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 RBM25P49756 843 aaKnown RBP15.34■□□□□ 0.05
ACTN1-219ENST00000556432 PTGDRQ13258 359 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 GAS6Q14393 721 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 CDCA2Q69YH5 1023 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-219ENST00000556432 Q6ZS52 159 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 SKAP1Q86WV1 359 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 ZSCAN18Q8TBC5 510 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-219ENST00000556432 KCNB2Q92953 911 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 LARP6Q9BRS8 491 aaKnown RBP15.34■□□□□ 0.05
ACTN1-219ENST00000556432 FZD8Q9H461 694 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 TRPV5Q9NQA5 729 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 SH2B1Q9NRF2 756 aaPredicted RBP15.34■□□□□ 0.05
ACTN1-219ENST00000556432 PCDHA12Q9UN75 941 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 INSL5Q9Y5Q6 135 aa15.34■□□□□ 0.05
ACTN1-219ENST00000556432 ATF2P15336 505 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 GJA1P17302 382 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 ATP2B1P20020 1258 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 HSPA4P34932 840 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 SOX9P48436 509 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 EVCP57679 992 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 SHC2P98077 582 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 CALCRLQ16602 461 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 UPP1Q16831 310 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 FAM187BQ17R55 369 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 DCAF4L1Q3SXM0 396 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 SLC8B1Q6J4K2 584 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 TCEAL8Q8IYN2 117 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 HS6ST3Q8IZP7 471 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 C3orf58Q8NDZ4 430 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 MCPH1Q8NEM0 835 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 DEPTORQ8TB45 409 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 OXER1Q8TDS5 423 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 ZNF512Q96ME7 567 aaPredicted RBP15.33■□□□□ 0.04
ACTN1-219ENST00000556432 HSD17B14Q9BPX1 270 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 ARRDC1-AS1Q9H2J1 176 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 ASAH2Q9NR71 780 aa15.33■□□□□ 0.04
ACTN1-219ENST00000556432 HEPACAM2A8MVW5 462 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 H7C4K7 107 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 K7ESF4 209 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 MICAL2O94851 1124 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 ABLIM3O94929 683 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 SEC24AO95486 1093 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 LIMK1P53667 647 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 TWF1Q12792 350 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 TOB2Q14106 344 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-219ENST00000556432 EEF1DP3Q658K8 133 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 C1orf228Q6PIY5 440 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 APBB1IPQ7Z5R6 666 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-219ENST00000556432 MFSD6LQ8IWD5 586 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 MSANTD3Q96H12 275 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 PPP1R10Q96QC0 940 aaKnown RBP15.32■□□□□ 0.04
ACTN1-219ENST00000556432 C8orf33Q9H7E9 229 aaPredicted RBP15.32■□□□□ 0.04
ACTN1-219ENST00000556432 FRYQ5TBA9 3013 aa15.32■□□□□ 0.04
ACTN1-219ENST00000556432 COL4A2P08572 1712 aa15.31■□□□□ 0.04
ACTN1-219ENST00000556432 ACKR2O00590 384 aa15.31■□□□□ 0.04
ACTN1-219ENST00000556432 TXKP42681 527 aa15.31■□□□□ 0.04
ACTN1-219ENST00000556432 YARSP54577 528 aaKnown RBP15.31■□□□□ 0.04
ACTN1-219ENST00000556432 TEAD2Q15562 447 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms