RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 ARL6IP4Q66PJ3 421 aaKnown RBP17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 EXOC8Q8IYI6 725 aa17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 HACE1Q8IYU2 909 aa17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 PIK3R5Q8WYR1 880 aa17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 DYDC2Q96IM9 177 aa17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 RAB23Q9ULC3 237 aa17.49■□□□□ 0.39
SDR39U1-217ENST00000556249 TBX3O15119 743 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 DKC1O60832 514 aaKnown RBP eCLIP17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 OR52Z1P0C646 297 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 HOXA9P31269 272 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 OR1D2P34982 312 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 ME1P48163 572 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 SRSF5Q13243 272 aaKnown RBP17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 TUSC3Q13454 348 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 CAPSQ13938 189 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 CALCRLQ16602 461 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 C4orf19Q8IY42 314 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 ZNF687Q8N1G0 1237 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 C4orf32Q8N8J7 132 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 KRI1Q8N9T8 703 aaKnown RBP17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 NETO1Q8TDF5 533 aa17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 MRPS17Q9Y2R5 130 aaKnown RBP17.48■□□□□ 0.39
SDR39U1-217ENST00000556249 GOLGA6L4A6NEF3 574 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 CUTAO60888 179 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 PRPF40AO75400 957 aaKnown RBP17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 ECI2O75521 394 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 RHOP08100 348 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 CEBPBP17676 345 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 MARCKSP29966 332 aaPredicted RBP17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 DMWDQ09019 674 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 EPHA7Q15375 998 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 LAIR1Q6GTX8 287 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 NCAPH2Q6IBW4 605 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 SLC27A1Q6PCB7 646 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 OTUD6AQ7L8S5 288 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 POTEDQ86YR6 584 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 TPH2Q8IWU9 490 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 FAM126AQ9BYI3 521 aaPredicted RBP17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 TMEM60Q9H2L4 133 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 KCNMB3Q9NPA1 279 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 SEMA4GQ9NTN9 838 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 SRPRBQ9Y5M8 271 aaKnown RBP17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 CHD8Q9HCK8 2581 aa17.47■□□□□ 0.39
SDR39U1-217ENST00000556249 A0A087WWV3 80 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 PTGESO14684 152 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 MARCH6O60337 910 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 GLRA2P23416 452 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 UBE2HP62256 183 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 RAB33AQ14088 237 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 TFDP1Q14186 410 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 MXD4Q14582 209 aaPredicted RBP17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 PCBP1Q15365 356 aaKnown RBP eCLIP17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 NFKBIBQ15653 356 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 SLFN12Q8IYM2 578 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 HAS1Q92839 578 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 FAM20AQ96MK3 541 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 MTMR9Q96QG7 549 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 CHRDQ9H2X0 955 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 LMAN1LQ9HAT1 526 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 LMBRD1Q9NUN5 540 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 FBXO2Q9UK22 296 aaPredicted RBP17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 KCNH3Q9ULD8 1083 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 PCDHA7Q9UN72 937 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 PPME1Q9Y570 386 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 CDY1Q9Y6F8 540 aa17.46■□□□□ 0.39
SDR39U1-217ENST00000556249 VWA8A3KMH1 1905 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 A0A1B0GUA9 196 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 TTLL13PA6NNM8 815 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 RETP07949 1114 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 ARL2P36404 184 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 SATB1Q01826 763 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 SIM2Q14190 667 aaPredicted RBP17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 ADALQ6DHV7 355 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 DTHD1Q6ZMT9 781 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 PRR23CQ6ZRP0 262 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 IFNLR1Q8IU57 520 aaPredicted RBP17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 CELF5Q8N6W0 485 aaKnown RBP17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 ZSWIM4Q9H7M6 989 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 BRD9Q9H8M2 597 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 SNTG2Q9NY99 539 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 USP20Q9Y2K6 914 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 USP24Q9UPU5 2620 aa17.45■□□□□ 0.38
SDR39U1-217ENST00000556249 A0A1W2PQ27 194 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 A0A1W2PQ64 194 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 A0A1W2PQD8 194 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 CHURC1-FNTBB4DL54 471 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 I3L4J1 428 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 HRO43593 1189 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 SLITRK3O94933 977 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 FCARP24071 287 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 HOXC13P31276 330 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 FNTBP49356 437 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 NRLP54845 237 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 UVSSAQ2YD98 709 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 MAEAQ7L5Y9 396 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 FAM3CQ92520 227 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 ELSPBP1Q96BH3 223 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 TCEAL4Q96EI5 215 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 RAB34Q9BZG1 259 aa17.44■□□□□ 0.38
SDR39U1-217ENST00000556249 TCHHQ07283 1943 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms