RNA–Protein interactions for RNA: ENST00000556175.1

SDR39U1-216, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 775 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-216ENST00000556175 VARS2Q5ST30 1063 aaKnown RBP23.58■■□□□ 1.37
SDR39U1-216ENST00000556175 SLC8B1Q6J4K2 584 aa23.58■■□□□ 1.37
SDR39U1-216ENST00000556175 KCNN1Q92952 543 aa23.58■■□□□ 1.37
SDR39U1-216ENST00000556175 BICD1Q96G01 975 aa23.58■■□□□ 1.37
SDR39U1-216ENST00000556175 ZBTB45Q96K62 511 aaPredicted RBP23.58■■□□□ 1.37
SDR39U1-216ENST00000556175 SLC2A4RGQ9NR83 387 aa23.58■■□□□ 1.37
SDR39U1-216ENST00000556175 KCNH3Q9ULD8 1083 aa23.58■■□□□ 1.37
SDR39U1-216ENST00000556175 STK25O00506 426 aa23.57■■□□□ 1.36
SDR39U1-216ENST00000556175 LONP1P36776 959 aaKnown RBP23.57■■□□□ 1.36
SDR39U1-216ENST00000556175 KYAT1Q16773 422 aa23.57■■□□□ 1.36
SDR39U1-216ENST00000556175 PABPC1LQ4VXU2 614 aaKnown RBP23.57■■□□□ 1.36
SDR39U1-216ENST00000556175 RSPO2Q6UXX9 243 aaPredicted RBP23.57■■□□□ 1.36
SDR39U1-216ENST00000556175 CCDC105Q8IYK2 499 aa23.57■■□□□ 1.36
SDR39U1-216ENST00000556175 RASSF8Q8NHQ8 419 aa23.57■■□□□ 1.36
SDR39U1-216ENST00000556175 ZNF461Q8TAF7 563 aa23.57■■□□□ 1.36
SDR39U1-216ENST00000556175 FGF13Q92913 245 aa23.57■■□□□ 1.36
SDR39U1-216ENST00000556175 PLEKHA5Q9HAU0 1116 aa23.57■■□□□ 1.36
SDR39U1-216ENST00000556175 PROB1E7EW31 1015 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 GFRA3O60609 400 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 CLTAP09496 248 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 ELF1P32519 619 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 ABCD1P33897 745 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 NTHL1P78549 312 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 ROR1Q01973 937 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 CACNB1Q02641 598 aaPredicted RBP23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 SLC10A6Q3KNW5 377 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 ARSHQ5FYA8 562 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 HAUS6Q7Z4H7 955 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 GPBP1Q86WP2 473 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 APPL2Q8NEU8 664 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 GPR152Q8TDT2 470 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 C18orf25Q96B23 403 aaPredicted RBP23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 ARHGEF3Q9NR81 526 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 CA14Q9ULX7 337 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 USP34Q70CQ2 3546 aa23.56■■□□□ 1.36
SDR39U1-216ENST00000556175 NPHP3-ACAD11A0A0J9YXS1 232 aa23.55■■□□□ 1.36
SDR39U1-216ENST00000556175 KRBA1A5PL33 1030 aa23.55■■□□□ 1.36
SDR39U1-216ENST00000556175 LRG1P02750 347 aa23.55■■□□□ 1.36
SDR39U1-216ENST00000556175 MCM4P33991 863 aa23.55■■□□□ 1.36
SDR39U1-216ENST00000556175 ZNF280DQ6N043 979 aa23.55■■□□□ 1.36
SDR39U1-216ENST00000556175 SUSD3Q96L08 255 aa23.55■■□□□ 1.36
SDR39U1-216ENST00000556175 REEP2Q9BRK0 252 aa23.55■■□□□ 1.36
SDR39U1-216ENST00000556175 PARVGQ9HBI0 331 aa23.55■■□□□ 1.36
SDR39U1-216ENST00000556175 ZFHX2Q9C0A1 2572 aaPredicted RBP23.55■■□□□ 1.36
SDR39U1-216ENST00000556175 PDCD11Q14690 1871 aaKnown RBP23.55■■□□□ 1.36
SDR39U1-216ENST00000556175 ARHGEF37A1IGU5 675 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 PRRG1O14668 218 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 HNRNPDLO14979 420 aaKnown RBP23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 PI15O43692 258 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 ABLIM3O94929 683 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 FAM13AO94988 1023 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 KRT18P05783 430 aaKnown RBP23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 PDCP20941 246 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 NBL1P41271 181 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 LIG4P49917 911 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 PPP2R3AQ06190 1150 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 PHLDB3Q6NSJ2 640 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 MYCT1Q8N699 235 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 DTWD2Q8NBA8 298 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 FGF14Q92915 247 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 TBC1D17Q9HA65 648 aa23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 DNMT3BQ9UBC3 853 aaKnown RBP23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 MRPS23Q9Y3D9 190 aaKnown RBP23.54■■□□□ 1.36
SDR39U1-216ENST00000556175 WDR27A2RRH5 827 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 K7ENM7 598 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 MEFVO15553 781 aaPredicted RBP23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 XPOTO43592 962 aaKnown RBP23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 TBCAO75347 108 aaKnown RBP23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 CXCL8P10145 99 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 ATF2P15336 505 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 ZNF131P52739 623 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 MRPL58Q14197 206 aaKnown RBP23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 CTXN3Q4LDR2 81 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 SEZ6Q53EL9 994 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 TPGS2Q68CL5 300 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 PARM1Q6UWI2 310 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 TCEAL8Q8IYN2 117 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 ITFG1Q8TB96 612 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 RAD54LQ92698 747 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 SHDQ96IW2 340 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 TSPAN18Q96SJ8 248 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 AVENQ9NQS1 362 aaPredicted RBP23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 HCFC1R1Q9NWW0 138 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 TUBGCP4Q9UGJ1 667 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 FBXL5Q9UKA1 691 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 MAFFQ9ULX9 164 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 TBX20Q9UMR3 447 aa23.53■■□□□ 1.36
SDR39U1-216ENST00000556175 TBC1D4O60343 1298 aa23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 PIGRP01833 764 aa23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 PLCG1P19174 1290 aa23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 CYP3A5P20815 502 aa23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 MARCKSP29966 332 aaPredicted RBP23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 ARPP19P56211 112 aa23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 DHX8Q14562 1220 aaKnown RBP23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 SF3A1Q15459 793 aaKnown RBP23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 NPAS3Q8IXF0 933 aa23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 CYP4F11Q9HBI6 524 aa23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 GDE1Q9NZC3 331 aa23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 UBQLN1Q9UMX0 589 aaKnown RBP23.52■■□□□ 1.36
SDR39U1-216ENST00000556175 PCDHB8Q9UN66 801 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms