RNA–Protein interactions for RNA: ENST00000556170.5

NEK9-209, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 3,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-209ENST00000556170 MTMR12Q9C0I1 747 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 NGRNQ9NPE2 291 aaKnown RBP15.78■□□□□ 0.12
NEK9-209ENST00000556170 RARAP10276 462 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 PTPRAP18433 802 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 PTENP60484 403 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 ADCY2Q08462 1091 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 ZNF844Q08AG5 666 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 DUOXA2Q1HG44 320 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 SEPT1Q8WYJ6 367 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 DDX60Q8IY21 1712 aaKnown RBP15.78■□□□□ 0.12
NEK9-209ENST00000556170 SHANK3Q9BYB0 1731 aa15.78■□□□□ 0.12
NEK9-209ENST00000556170 C19orf81C9J6K1 198 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 PRKCBP05771 671 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 TXNP10599 105 aaKnown RBP15.77■□□□□ 0.12
NEK9-209ENST00000556170 HSD17B4P51659 736 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 GTF2BQ00403 316 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 PTGISQ16647 500 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 LY6KQ17RY6 165 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 IZUMO3Q5VZ72 239 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 EP400NLQ6ZTU2 488 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 LRRC57Q8N9N7 239 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 KCTD6Q8NC69 237 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 SCFD2Q8WU76 684 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 MRPL4Q9BYD3 311 aaKnown RBP15.77■□□□□ 0.12
NEK9-209ENST00000556170 OSBPL8Q9BZF1 889 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 MAFGO15525 162 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 MMP14P50281 582 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 KRT81Q14533 505 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 FKBP1CQ5VVH2 108 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 DPP9Q86TI2 863 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 C1orf131Q8NDD1 294 aaKnown RBP15.77■□□□□ 0.12
NEK9-209ENST00000556170 PPP1R14CQ8TAE6 165 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 FAM81BQ96LP2 452 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 SCINQ9Y6U3 715 aa15.77■□□□□ 0.12
NEK9-209ENST00000556170 SUPT20HL2P0C7V6 817 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 BRAFP15056 766 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 HSPA9P38646 679 aaKnown RBP15.77■□□□□ 0.11
NEK9-209ENST00000556170 RPL21P46778 160 aaKnown RBP15.77■□□□□ 0.11
NEK9-209ENST00000556170 PSMC1P62191 440 aaKnown RBP15.77■□□□□ 0.11
NEK9-209ENST00000556170 TFDP1Q14186 410 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 TMEM132BQ14DG7 1078 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 CASC4Q6P4E1 433 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 ENOSF1Q7L5Y1 443 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 TMC3Q7Z5M5 1100 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 PRMT1Q99873 361 aaKnown RBP15.77■□□□□ 0.11
NEK9-209ENST00000556170 ADPGKQ9BRR6 497 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 TMBIM4Q9HC24 238 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 PLCH1Q4KWH8 1693 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 TCRBV7S2A1N4TA0A589 114 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 ZNF862O60290 1169 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 GRAP2O75791 330 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 GZMAP12544 262 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 KCNT1Q5JUK3 1230 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 IQCKQ8N0W5 287 aa15.77■□□□□ 0.11
NEK9-209ENST00000556170 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.76■□□□□ 0.11
NEK9-209ENST00000556170 DSG3P32926 999 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 IREB2P48200 963 aaKnown RBP15.76■□□□□ 0.11
NEK9-209ENST00000556170 GPC3P51654 580 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 CLCN3P51790 818 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 ZNF131P52739 623 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 SMAD1Q15797 465 aaKnown RBP15.76■□□□□ 0.11
NEK9-209ENST00000556170 PRUNE1Q86TP1 453 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 MAP4K3Q8IVH8 894 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.76■□□□□ 0.11
NEK9-209ENST00000556170 HES6Q96HZ4 224 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 PABPC3Q9H361 631 aaKnown RBP15.76■□□□□ 0.11
NEK9-209ENST00000556170 GEMIN8Q9NWZ8 242 aaKnown RBP15.76■□□□□ 0.11
NEK9-209ENST00000556170 SPAG7O75391 227 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 ATP2A2P16615 1042 aaKnown RBP15.76■□□□□ 0.11
NEK9-209ENST00000556170 ITGA8P53708 1063 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 JAM2P57087 298 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 CUL2Q13617 745 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 GPAT2Q6NUI2 795 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 CNKSR2Q8WXI2 1034 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 CNOT10Q9H9A5 744 aaKnown RBP15.76■□□□□ 0.11
NEK9-209ENST00000556170 RNF181Q9P0P0 153 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 MYH15Q9Y2K3 1946 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 RASA4BC9J798 803 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 RASA4O43374 803 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 SHBGP04278 402 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 YWHAGP61981 247 aaKnown RBP eCLIP15.76■□□□□ 0.11
NEK9-209ENST00000556170 TMEM62Q0P6H9 643 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 PPP2R5DQ14738 602 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 KIF22Q14807 665 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 SETDB1Q15047 1291 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 E2F5Q15329 346 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 PPP6R3Q5H9R7 873 aaPredicted RBP15.76■□□□□ 0.11
NEK9-209ENST00000556170 HIBCHQ6NVY1 386 aaPredicted RBP15.76■□□□□ 0.11
NEK9-209ENST00000556170 MYCBPAPQ8TBZ2 947 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 TBC1D31Q96DN5 1066 aa15.76■□□□□ 0.11
NEK9-209ENST00000556170 F5H423 210 aaPredicted RBP15.75■□□□□ 0.11
NEK9-209ENST00000556170 ARSEP51690 589 aa15.75■□□□□ 0.11
NEK9-209ENST00000556170 IFI35P80217 286 aaPredicted RBP15.75■□□□□ 0.11
NEK9-209ENST00000556170 ATP11AP98196 1134 aa15.75■□□□□ 0.11
NEK9-209ENST00000556170 FMO1Q01740 532 aa15.75■□□□□ 0.11
NEK9-209ENST00000556170 BYSLQ13895 437 aaKnown RBP15.75■□□□□ 0.11
NEK9-209ENST00000556170 ANKMY2Q8IV38 441 aa15.75■□□□□ 0.11
NEK9-209ENST00000556170 ATL2Q8NHH9 583 aa15.75■□□□□ 0.11
NEK9-209ENST00000556170 CHST7Q9NS84 486 aa15.75■□□□□ 0.11
NEK9-209ENST00000556170 TBC1D12O60347 775 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms