RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 NFE2L3Q9Y4A8 694 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 MRPL42Q9Y6G3 142 aaKnown RBP8.26□□□□□ -1.09
TDP1-214ENST00000556063 COL4A6Q14031 1691 aa8.26□□□□□ -1.09
TDP1-214ENST00000556063 PDCD11Q14690 1871 aaKnown RBP8.26□□□□□ -1.09
TDP1-214ENST00000556063 DNAH12Q6ZR08 3092 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 LCHNA4D1U4 455 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 CASTOR2A6NHX0 329 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 RBAK-RBAKDNI3L0D1 243 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 TRAPPC3O43617 180 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 N4BP1O75113 896 aaKnown RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 TADA2AO75478 443 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 B3GAT3O94766 335 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 DDHD2O94830 711 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 GALTP07902 379 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 MYOGP15173 224 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 CDK11BP21127 795 aaKnown RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 EEF1GP26641 437 aaKnown RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 LRPAP1P30533 357 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 PBX2P40425 430 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 PNPLA4P41247 253 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 MTIF2P46199 727 aaKnown RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 AFF1P51825 1210 aaKnown RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 MARSP56192 900 aaKnown RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 BCAR1P56945 870 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 ZNF445P59923 1031 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 ERVK-21P61565 698 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 CLDN10P78369 228 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 RBP5P82980 135 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 TAP1Q03518 808 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 ELAVL2Q12926 359 aaKnown RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 MYO1EQ12965 1108 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 BIRC3Q13489 604 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 TRPC3Q13507 836 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 DCAF17Q5H9S7 520 aaPredicted RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 LRSAM1Q6UWE0 723 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 ZNF280BQ86YH2 543 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 COLGALT1Q8NBJ5 622 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 CCDC150Q8NCX0 1101 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 ZSWIM2Q8NEG5 633 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 CNOT6LQ96LI5 555 aaKnown RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 ZNF560Q96MR9 790 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 ZMAT2Q96NC0 199 aaKnown RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 IMPG2Q9BZV3 1241 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 CWH43Q9H720 699 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 DPP3Q9NY33 737 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 ITGA11Q9UKX5 1188 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 PLAGL2Q9UPG8 496 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 YBX2Q9Y2T7 364 aaKnown RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 PRG3Q9Y2Y8 225 aaPredicted RBP8.25□□□□□ -1.09
TDP1-214ENST00000556063 NUB1Q9Y5A7 615 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.25□□□□□ -1.09
TDP1-214ENST00000556063 GBF1Q92538 1859 aa8.25□□□□□ -1.09
TDP1-214ENST00000556063 MYO7AQ13402 2215 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 LRRIQ3A6PVS8 624 aaPredicted RBP8.24□□□□□ -1.09
TDP1-214ENST00000556063 KCNJ18B7U540 433 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 TMEM189-UBE2V1I3L0A0 370 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 PODXLO00592 558 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 NRP1O14786 923 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 CLSTN1O94985 981 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 KRT19P08727 400 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 SLC11A1P49279 550 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 MCCD1P59942 119 aaPredicted RBP8.24□□□□□ -1.09
TDP1-214ENST00000556063 UBE3AQ05086 875 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 KCNJ12Q14500 433 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 NAB2Q15742 525 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 EPC2Q52LR7 807 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 ZNF697Q5TEC3 545 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 KRT39Q6A163 491 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 TRAPPC11Q7Z392 1133 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 EFCAB13Q8IY85 973 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 SLC39A11Q8N1S5 342 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 AOPEPQ8N6M6 819 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 LRRC52Q8N7C0 313 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 FBXO22Q8NEZ5 403 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 FAM200AQ8TCP9 573 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 C18orf25Q96B23 403 aaPredicted RBP8.24□□□□□ -1.09
TDP1-214ENST00000556063 BORCS6Q96GS4 357 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 MED15Q96RN5 788 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 MTMR12Q9C0I1 747 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 TMEM8AQ9HCN3 771 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 DNAJB4Q9UDY4 337 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 TUBGCP4Q9UGJ1 667 aa8.24□□□□□ -1.09
TDP1-214ENST00000556063 SF3B1O75533 1304 aaKnown RBP eCLIP8.24□□□□□ -1.09
TDP1-214ENST00000556063 NLRC5Q86WI3 1866 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 MKI67P46013 3256 aaKnown RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 ANO9A1A5B4 782 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 C5orf67F2Z3F1 127 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 P4HA2O15460 535 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 MEFVO15553 781 aaPredicted RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 LPXNO60711 386 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 FGF18O76093 207 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 AFPP02771 609 aaKnown RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 C4BPAP04003 597 aaKnown RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 ITGB3P05106 788 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 TRIM49P0CI25 452 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 TRIM49CP0CI26 452 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 P4HA1P13674 534 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 POLR2BP30876 1174 aaKnown RBP8.23□□□□□ -1.09
TDP1-214ENST00000556063 ATICP31939 592 aa8.23□□□□□ -1.09
TDP1-214ENST00000556063 PIK3CAP42336 1068 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms