RNA–Protein interactions for RNA: ENST00000555759.1

SYNE3-204, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 2

Gene SYNE3, Length 5,493 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-204ENST00000555759 APOL1O14791 398 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 RABL6Q3YEC7 729 aaPredicted RBP18.41■□□□□ 0.54
SYNE3-204ENST00000555759 LARGE2Q8N3Y3 721 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 SEPT8Q92599 483 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 ZFRQ96KR1 1074 aaKnown RBP18.41■□□□□ 0.54
SYNE3-204ENST00000555759 MKNK1Q9BUB5 465 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 DCP1AQ9NPI6 582 aaPredicted RBP18.41■□□□□ 0.54
SYNE3-204ENST00000555759 TFR2Q9UP52 801 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 INPP5FQ9Y2H2 1132 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 HNRNPCL2B2RXH8 293 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 F8VZ95 297 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 TDP2O95551 362 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 CPA2P48052 419 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 SRBD1Q8N5C6 995 aaKnown RBP18.41■□□□□ 0.54
SYNE3-204ENST00000555759 STK32AQ8WU08 396 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 TBC1D22BQ9NU19 505 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 HERC5Q9UII4 1024 aaKnown RBP18.41■□□□□ 0.54
SYNE3-204ENST00000555759 ZNF839A8K0R7 811 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 TRAPPC3O43617 180 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 HABP4Q5JVS0 413 aaKnown RBP18.41■□□□□ 0.54
SYNE3-204ENST00000555759 CLEC4FQ8N1N0 589 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 NMD3Q96D46 503 aaKnown RBP18.41■□□□□ 0.54
SYNE3-204ENST00000555759 PI4KBQ9UBF8 816 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 MYO5CQ9NQX4 1742 aa18.41■□□□□ 0.54
SYNE3-204ENST00000555759 FAM213AQ9BRX8 229 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 HOXA13P31271 388 aaPredicted RBP18.4■□□□□ 0.54
SYNE3-204ENST00000555759 SNX30Q5VWJ9 437 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 DCAF15Q66K64 600 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 ARID3BQ8IVW6 561 aaPredicted RBP18.4■□□□□ 0.54
SYNE3-204ENST00000555759 FSD1LQ9BXM9 530 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 PCMTD2Q9NV79 361 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 ATP8B3O60423 1300 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 TMEM247A6NEH6 219 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 F8W8V4 182 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 TULP2O00295 520 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 SORBS3O60504 671 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 P4HBP07237 508 aaKnown RBP18.4■□□□□ 0.54
SYNE3-204ENST00000555759 CDH6P55285 790 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 TBX2Q13207 712 aaPredicted RBP18.4■□□□□ 0.54
SYNE3-204ENST00000555759 C4orf50Q6ZRC1 276 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 ZSWIM1Q9BR11 485 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 TUFT1Q9NNX1 390 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 TAGLN3Q9UI15 199 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 P4HA2O15460 535 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 ZNF394Q53GI3 561 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 MEI1Q5TIA1 1274 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 C4orf22Q6V702 233 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 ZBTB1Q9Y2K1 713 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 A2ML1A8K2U0 1454 aa18.4■□□□□ 0.54
SYNE3-204ENST00000555759 A0A0A6YYK5 440 aaPredicted RBP18.39■□□□□ 0.54
SYNE3-204ENST00000555759 MYMKA6NI61 221 aa18.39■□□□□ 0.54
SYNE3-204ENST00000555759 SLC16A4O15374 487 aa18.39■□□□□ 0.54
SYNE3-204ENST00000555759 GLI1P08151 1106 aa18.39■□□□□ 0.54
SYNE3-204ENST00000555759 PIGHQ14442 188 aaPredicted RBP18.39■□□□□ 0.54
SYNE3-204ENST00000555759 CHI3L2Q15782 390 aa18.39■□□□□ 0.54
SYNE3-204ENST00000555759 TRAF7Q6Q0C0 670 aa18.39■□□□□ 0.54
SYNE3-204ENST00000555759 PPIL6Q8IXY8 311 aa18.39■□□□□ 0.54
SYNE3-204ENST00000555759 UTP6Q9NYH9 597 aaKnown RBP18.39■□□□□ 0.54
SYNE3-204ENST00000555759 NAGPAQ9UK23 515 aa18.39■□□□□ 0.54
SYNE3-204ENST00000555759 SLC13A4Q9UKG4 626 aa18.39■□□□□ 0.54
SYNE3-204ENST00000555759 FAM205CA6NFA0 338 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 SPDYE2BA6NHP3 402 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 SPDYE6P0CI01 402 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 COPB2P35606 906 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 KCNQ4P56696 695 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 ROR2Q01974 943 aaKnown RBP18.39■□□□□ 0.53
SYNE3-204ENST00000555759 DDR1Q08345 913 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 FRA10AC1Q70Z53 315 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 SCN3BQ9NY72 215 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 KIAA0391O15091 583 aaKnown RBP18.39■□□□□ 0.53
SYNE3-204ENST00000555759 EZH2Q15910 746 aaKnown RBP18.39■□□□□ 0.53
SYNE3-204ENST00000555759 UGP2Q16851 508 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 GPD1LQ8N335 351 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 LACRTQ9GZZ8 138 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 WDR35Q9P2L0 1181 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 ATXN2Q99700 1313 aaKnown RBP18.39■□□□□ 0.53
SYNE3-204ENST00000555759 DENND3A2RUS2 1198 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 KCTD17Q8N5Z5 321 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 CENPTQ96BT3 561 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 TIPINQ9BVW5 301 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 VPS33BQ9H267 617 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 UNC45AQ9H3U1 944 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 PAK5Q9P286 719 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 FAM153AQ9UHL3 310 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 ADCY10Q96PN6 1610 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 UTYO14607 1347 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 ANTXR2P58335 489 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 METTL23Q86XA0 190 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 AGR3Q8TD06 166 aa18.39■□□□□ 0.53
SYNE3-204ENST00000555759 MYO3BQ8WXR4 1341 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 SRGAP2CP0DJJ0 459 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 SLC9A1P19634 815 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 KRT27Q7Z3Y8 459 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 NMT2O60551 498 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 CYP2D6P10635 497 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 PLOD1Q02809 727 aaPredicted RBP18.38■□□□□ 0.53
SYNE3-204ENST00000555759 CD302Q8IX05 232 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 DDIASQ8IXT1 998 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 ZNF212Q9UDV6 495 aa18.38■□□□□ 0.53
SYNE3-204ENST00000555759 PBRM1Q86U86 1689 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms