RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 DDX27Q96GQ7 796 aaKnown RBP22.33■■□□□ 1.17
VTI1B-205ENST00000555543 CLSTN3Q9BQT9 956 aa22.33■■□□□ 1.17
VTI1B-205ENST00000555543 POMKQ9H5K3 350 aa22.33■■□□□ 1.17
VTI1B-205ENST00000555543 RPF1Q9H9Y2 349 aaKnown RBP22.33■■□□□ 1.17
VTI1B-205ENST00000555543 FAM13BQ9NYF5 915 aa22.33■■□□□ 1.17
VTI1B-205ENST00000555543 ADAM12O43184 909 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 TGM5O43548 720 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 ACOT2P49753 483 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 ASIC1P78348 528 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 KRT85P78386 507 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 CREMQ03060 361 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 ZBTB6Q15916 424 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 ADALQ6DHV7 355 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 CES5AQ6NT32 575 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 RPGRIP1Q96KN7 1286 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 SPATA32Q96LK8 384 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 ACCSQ96QU6 501 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 AGO2Q9UKV8 859 aaKnown RBP22.32■■□□□ 1.16
VTI1B-205ENST00000555543 KCNH3Q9ULD8 1083 aa22.32■■□□□ 1.16
VTI1B-205ENST00000555543 SP100P23497 879 aaPredicted RBP22.31■■□□□ 1.16
VTI1B-205ENST00000555543 RPL9P32969 192 aaKnown RBP22.31■■□□□ 1.16
VTI1B-205ENST00000555543 GUCY2FP51841 1108 aa22.31■■□□□ 1.16
VTI1B-205ENST00000555543 SLFN12LQ6IEE8 588 aa22.31■■□□□ 1.16
VTI1B-205ENST00000555543 CNNM4Q6P4Q7 775 aa22.31■■□□□ 1.16
VTI1B-205ENST00000555543 LILRA6Q6PI73 481 aa22.31■■□□□ 1.16
VTI1B-205ENST00000555543 C7orf25Q9BPX7 421 aa22.31■■□□□ 1.16
VTI1B-205ENST00000555543 LRRC27Q9C0I9 530 aa22.31■■□□□ 1.16
VTI1B-205ENST00000555543 MAGEF1Q9HAY2 307 aa22.31■■□□□ 1.16
VTI1B-205ENST00000555543 PCDHB13Q9Y5F0 798 aa22.31■■□□□ 1.16
VTI1B-205ENST00000555543 ANK1P16157 1881 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 SPDYE4A6NLX3 237 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 PRPF6O94906 941 aaKnown RBP22.3■■□□□ 1.16
VTI1B-205ENST00000555543 NFICP08651 508 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 MTHFRP42898 656 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 AMPD3Q01432 767 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 ALCAMQ13740 583 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 JADE1Q6IE81 842 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 CRELD2Q6UXH1 353 aaPredicted RBP22.3■■□□□ 1.16
VTI1B-205ENST00000555543 GRAMD1CQ8IYS0 662 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 ZSWIM2Q8NEG5 633 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 POMGNT1Q8WZA1 660 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 FAM212AQ96EL1 285 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 RIPOR3Q96MK2 946 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 BLZF1Q9H2G9 400 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 UBQLN1Q9UMX0 589 aaKnown RBP22.3■■□□□ 1.16
VTI1B-205ENST00000555543 EXOC7Q9UPT5 735 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 C2orf16Q68DN1 1984 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 DENND4AQ7Z401 1863 aa22.3■■□□□ 1.16
VTI1B-205ENST00000555543 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.29■■□□□ 1.16
VTI1B-205ENST00000555543 PI4K2BG5E9Z4 385 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 TRAPPC3O43617 180 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 ACTN4O43707 911 aaKnown RBP22.29■■□□□ 1.16
VTI1B-205ENST00000555543 RFPL2O75678 378 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 PFKFB1P16118 471 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 LRPAP1P30533 357 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 RSPO2Q6UXX9 243 aaPredicted RBP22.29■■□□□ 1.16
VTI1B-205ENST00000555543 GPR149Q86SP6 731 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 RNF135Q8IUD6 432 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 NECTIN4Q96NY8 510 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 MTRRQ9UBK8 725 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 SERTAD1Q9UHV2 236 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 NUB1Q9Y5A7 615 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 TCHHQ07283 1943 aa22.29■■□□□ 1.16
VTI1B-205ENST00000555543 A0A1B0GVL5 298 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 PPEF2O14830 753 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 CMA1P23946 247 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 AFMP43652 599 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 EHHADHQ08426 723 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 PDXDC1Q6P996 788 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 CMASQ8NFW8 434 aaPredicted RBP22.28■■□□□ 1.16
VTI1B-205ENST00000555543 SAAL1Q96ER3 474 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 SUSD3Q96L08 255 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 TSHZ2Q9NRE2 1034 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 MUTYHQ9UIF7 546 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 FBXW11Q9UKB1 542 aa22.28■■□□□ 1.16
VTI1B-205ENST00000555543 C1RP00736 705 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 SLFN14P0C7P3 912 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 CYP3A5P20815 502 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 MCM4P33991 863 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 OR1D2P34982 312 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 HOXD13P35453 343 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 WNT7BP56706 349 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 CUL4BQ13620 913 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 POSTNQ15063 836 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 FAM26FQ5R3K3 315 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 ATAT1Q5SQI0 421 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 VARS2Q5ST30 1063 aaKnown RBP22.27■■□□□ 1.16
VTI1B-205ENST00000555543 SPATA1Q5VX52 437 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 C15orf39Q6ZRI6 1047 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 UNC13DQ70J99 1090 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 CD302Q8IX05 232 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 SYCP3Q8IZU3 236 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 KREMEN2Q8NCW0 462 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 HDAC7Q8WUI4 952 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 ZNF707Q96C28 371 aaPredicted RBP22.27■■□□□ 1.16
VTI1B-205ENST00000555543 CBWD1Q9BRT8 395 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 PLEKHA4Q9H4M7 779 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 GDPD2Q9HCC8 539 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 C11orf16Q9NQ32 467 aa22.27■■□□□ 1.16
VTI1B-205ENST00000555543 HPSEQ9Y251 543 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms