RNA–Protein interactions for RNA: ENST00000555379.1

LINC00641-201, long intergenic non-protein coding RNA 641, humanhuman

Gene LINC00641, Length 5,425 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00641-201ENST00000555379 GNASQ5JWF2 1037 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 METTL7BQ6UX53 244 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 MFN1Q8IWA4 741 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 HPS3Q969F9 1004 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 FTHL17Q9BXU8 183 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 KDM4CQ9H3R0 1056 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 RAD18Q9NS91 495 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 SMARCAL1Q9NZC9 954 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 KNDC1Q76NI1 1749 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 CYP2D7A0A087X1C5 515 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 GADD45BO75293 160 aaPredicted RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 CD58P19256 250 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 DSG3P32926 999 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 SREBF1P36956 1147 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 EIF4A3P38919 411 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 HARS2P49590 506 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 DR1Q01658 176 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 AARS2Q5JTZ9 985 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 RWDD4Q6NW29 188 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 USP17L6PQ6QN14 398 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 METTL3Q86U44 580 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 FAM133AQ8N9E0 248 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 TMC2Q8TDI7 906 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 PYROXD1Q8WU10 500 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 ANKS1AQ92625 1134 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 MRPS31Q92665 395 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 NIF3L1Q9GZT8 377 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 FAM124BQ9H5Z6 455 aaPredicted RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 A0A1W2PQJ5 194 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 PRRG1O14668 218 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 APOL1O14791 398 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 PLA2G6O60733 806 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 ADKP55263 362 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 ESRRGP62508 458 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 EHHADHQ08426 723 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 KRT31Q15323 416 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 ZNF280DQ6N043 979 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 CHADLQ6NUI6 762 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 CLEC17AQ6ZS10 378 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 LINC00523Q86TU6 105 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 USP38Q8NB14 1042 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 PPHLN1Q8NEY8 458 aaKnown RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 OTUB1Q96FW1 271 aaPredicted RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 BRD8Q9H0E9 1235 aa8.88□□□□□ -0.99
LINC00641-201ENST00000555379 FAM217BQ9NTX9 383 aaPredicted RBP8.88□□□□□ -0.99
LINC00641-201ENST00000555379 XYLBO75191 536 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 SIRT2Q8IXJ6 389 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 C18orf8Q96DM3 657 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 TMEM63CQ9P1W3 806 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 VCLP18206 1134 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 BCAR1P56945 870 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 ROR1Q01973 937 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 PTK2BQ14289 1009 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 SMYD5Q6GMV2 418 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 TMEM270Q6UE05 265 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 DDX42Q86XP3 938 aaKnown RBP eCLIP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 ZDHHC17Q8IUH5 632 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 HERC6Q8IVU3 1022 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 C4orf19Q8IY42 314 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 KIFC3Q9BVG8 833 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 DCLK3Q9C098 648 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 EML4Q9HC35 981 aaKnown RBP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 HMX1Q9NP08 348 aaPredicted RBP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 KCNQ5Q9NR82 932 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 STK38LQ9Y2H1 464 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 POLRMTO00411 1230 aaKnown RBP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 OGTO15294 1046 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 CAPN15O75808 1086 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 DNAJB2P25686 324 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 HPDP32754 393 aaPredicted RBP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 CACNB3P54284 484 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 PRKCQQ04759 706 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 PPP2R5CQ13362 524 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 PDK1Q15118 436 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 SKIV2LQ15477 1246 aaKnown RBP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 TIGD7Q6NT04 549 aaPredicted RBP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 UGT3A1Q6NUS8 523 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 KIAA2013Q8IYS2 634 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 FAF2Q96CS3 445 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 WDR70Q9NW82 654 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 PCDHB2Q9Y5E7 798 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 POTECB2RU33 542 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 MCF2P10911 925 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 CYP2B6P20813 491 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 HDAC4P56524 1084 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 KAZNQ674X7 775 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 ZNF483Q8TF39 744 aaPredicted RBP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 APBB2Q92870 758 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 UPF3AQ9H1J1 476 aaKnown RBP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 UNC45AQ9H3U1 944 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 ANAPC7Q9UJX3 599 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 POLIQ9UNA4 740 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 MEGF6O75095 1541 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 SYNJ2BP-COX16A0A087WUM0 186 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 HNRNPCL1O60812 293 aaKnown RBP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 RFX5P48382 616 aaPredicted RBP8.87□□□□□ -0.99
LINC00641-201ENST00000555379 KCNQ4P56696 695 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 SRLQ86TD4 932 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 TXNRD3Q86VQ6 643 aa8.87□□□□□ -0.99
LINC00641-201ENST00000555379 ZNF564Q8TBZ8 553 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms