RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TNNI1P19237 187 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 SLC11A1P49279 550 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 TPD52L1Q16890 204 aaPredicted RBP13.72□□□□□ -0.21
SYNE2-219ENST00000555323 TRIM59Q8IWR1 403 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
SYNE2-219ENST00000555323 COLGALT1Q8NBJ5 622 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 OR5B17Q8NGF7 314 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 TIFAQ96CG3 184 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 TGS1Q96RS0 853 aaKnown RBP13.72□□□□□ -0.21
SYNE2-219ENST00000555323 NKX2-4Q9H2Z4 354 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 SLC28A3Q9HAS3 691 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 SAMSN1Q9NSI8 373 aaKnown RBP13.72□□□□□ -0.21
SYNE2-219ENST00000555323 DPP3Q9NY33 737 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 FAN1Q9Y2M0 1017 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 CITO14578 2027 aa13.72□□□□□ -0.21
SYNE2-219ENST00000555323 PTPRJQ12913 1337 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 LRRC10BA6NIK2 292 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 PMM2O15305 246 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 ZC3H11AO75152 810 aaKnown RBP eCLIP13.71□□□□□ -0.21
SYNE2-219ENST00000555323 PAX3P23760 479 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 CLCNKBP51801 687 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 TFAMQ00059 246 aaKnown RBP13.71□□□□□ -0.21
SYNE2-219ENST00000555323 PLCB3Q01970 1234 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 PPP3CAQ08209 521 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 ZACNQ401N2 412 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 CDKAL1Q5VV42 579 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 CD300LGQ6UXG3 332 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 TRAPPC11Q7Z392 1133 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 FAM114A1Q8IWE2 563 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 SLC39A11Q8N1S5 342 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 C1orf127Q8N9H9 656 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 SLC35C1Q96A29 364 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 ANKRD36BP1Q96IX9 119 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 ZNF558Q96NG5 402 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 PAAF1Q9BRP4 392 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 ANP32EQ9BTT0 268 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 COLEC11Q9BWP8 271 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 HSD3B7Q9H2F3 369 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 FANCLQ9NW38 375 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 TUBGCP4Q9UGJ1 667 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 ITGA11Q9UKX5 1188 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 PCDHB12Q9Y5F1 795 aa13.71□□□□□ -0.21
SYNE2-219ENST00000555323 TRIP11Q15643 1979 aa13.71□□□□□ -0.22
SYNE2-219ENST00000555323 CASTOR2A6NHX0 329 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 STX10O60499 249 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 CST3P01034 146 aaPredicted RBP13.7□□□□□ -0.22
SYNE2-219ENST00000555323 TNNC2P02585 160 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 TMEM191BP0C7N4 346 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 PRKCSHP14314 528 aaPredicted RBP13.7□□□□□ -0.22
SYNE2-219ENST00000555323 ZNF18P17022 549 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 EEF1GP26641 437 aaKnown RBP13.7□□□□□ -0.22
SYNE2-219ENST00000555323 PPM1AP35813 382 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 OR1G1P47890 313 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 CCDC40Q4G0X9 1142 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 EPC2Q52LR7 807 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 SPOUT1Q5T280 376 aaKnown RBP13.7□□□□□ -0.22
SYNE2-219ENST00000555323 C9orf57Q5W0N0 161 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 PPP2R2DQ66LE6 453 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 GPR153Q6NV75 609 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 SV2AQ7L0J3 742 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 FAM200AQ8TCP9 573 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 IGSF21Q96ID5 467 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 CNOT6LQ96LI5 555 aaKnown RBP13.7□□□□□ -0.22
SYNE2-219ENST00000555323 C17orf80Q9BSJ5 609 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 MTMR12Q9C0I1 747 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 TSPY26PQ9H489 355 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 GOLGA2P5Q9HBQ8 144 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 CBX8Q9HC52 389 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 TMEM8AQ9HCN3 771 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 MARCH5Q9NX47 278 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 SPG21Q9NZD8 308 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 SIX4Q9UIU6 781 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 COQ4Q9Y3A0 265 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 LAMA2P24043 3122 aaKnown RBP13.7□□□□□ -0.22
SYNE2-219ENST00000555323 ANK1P16157 1881 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 RALGAPA2Q2PPJ7 1873 aa13.7□□□□□ -0.22
SYNE2-219ENST00000555323 NT5C1B-RDH14C9J2C7 533 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 SOX1O00570 391 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-219ENST00000555323 PODXLO00592 558 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 B3GAT3O94766 335 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 AARSP49588 968 aaKnown RBP eCLIP13.69□□□□□ -0.22
SYNE2-219ENST00000555323 GUCY2FP51841 1108 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 RBP5P82980 135 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 TCP11X2Q5H9J9 407 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 HABP4Q5JVS0 413 aaKnown RBP13.69□□□□□ -0.22
SYNE2-219ENST00000555323 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
SYNE2-219ENST00000555323 LMBRD2Q68DH5 695 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-219ENST00000555323 KRT39Q6A163 491 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 TMEM173Q86WV6 379 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-219ENST00000555323 RNF168Q8IYW5 571 aaPredicted RBP13.69□□□□□ -0.22
SYNE2-219ENST00000555323 AOPEPQ8N6M6 819 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 LRRC52Q8N7C0 313 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 C3orf58Q8NDZ4 430 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 VRTNQ9H8Y1 702 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 CACNG4Q9UBN1 327 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 STK39Q9UEW8 545 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 LZTS1Q9Y250 596 aa13.69□□□□□ -0.22
SYNE2-219ENST00000555323 BECN2A8MW95 431 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 KCNJ18B7U540 433 aa13.68□□□□□ -0.22
SYNE2-219ENST00000555323 H3BNC9 293 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms