RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 ZNF211Q13398 564 aaPredicted RBP17.66■□□□□ 0.42
PCNX1-209ENST00000554879 ABHD16BQ9H3Z7 469 aa17.66■□□□□ 0.42
PCNX1-209ENST00000554879 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.66■□□□□ 0.42
PCNX1-209ENST00000554879 ADCY3O60266 1144 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 SNUPNO95149 360 aaKnown RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 CALCAP01258 141 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 GARTP22102 1010 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 CAPSQ13938 189 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 NAB2Q15742 525 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 DNAI2Q9GZS0 605 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 HAUS2Q9NVX0 235 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 MEFVO15553 781 aaPredicted RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 TOM1L1O75674 476 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 GSTA5Q7RTV2 222 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 MSANTD4Q8NCY6 345 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 CPA5Q8WXQ8 436 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 SYN2Q92777 582 aaPredicted RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 GPR20Q99678 358 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 TMEM165Q9HC07 324 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 MTUS1Q9ULD2 1270 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 KCNH4Q9UQ05 1017 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 MYH15Q9Y2K3 1946 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 GNA15P30679 374 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 NOP14P78316 857 aaKnown RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 BEX3Q00994 111 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 RNF10Q8N5U6 811 aaKnown RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 GCOM2Q9BZD3 368 aaPredicted RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 REXO2Q9Y3B8 237 aaKnown RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 hCG_2014768A0A024R1R8 64 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 LRRIQ3A6PVS8 624 aaPredicted RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 YWHAEP62258 255 aaKnown RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 CCDC25Q86WR0 208 aa17.65■□□□□ 0.42
PCNX1-209ENST00000554879 L3MBTL3Q96JM7 780 aaPredicted RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 PIN4Q9Y237 131 aaKnown RBP17.65■□□□□ 0.42
PCNX1-209ENST00000554879 SMIM23A6NLE4 172 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 TLR3O15455 904 aaKnown RBP17.64■□□□□ 0.41
PCNX1-209ENST00000554879 GUCY2FP51841 1108 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 GUCY2DQ02846 1103 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 SURF1Q15526 300 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 THEMIS2Q5TEJ8 643 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 CHADLQ6NUI6 762 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 RPGRIP1Q96KN7 1286 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 GANQ9H2C0 597 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 VTA1Q9NP79 307 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 USH1CQ9Y6N9 552 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 SNRPFP62306 86 aaKnown RBP17.64■□□□□ 0.41
PCNX1-209ENST00000554879 GPC5P78333 572 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 PHLDB3Q6NSJ2 640 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 KIF12Q96FN5 646 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 RNF19AQ9NV58 838 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 ADAM22Q9P0K1 906 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 ANAPC7Q9UJX3 599 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 SYNGAP1Q96PV0 1343 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 ANO9A1A5B4 782 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 NCKAP1LP55160 1127 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 SLC35G2Q8TBE7 412 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 LENG1Q96BZ8 264 aaPredicted RBP17.64■□□□□ 0.41
PCNX1-209ENST00000554879 HEXIM2Q96MH2 286 aaKnown RBP17.64■□□□□ 0.41
PCNX1-209ENST00000554879 DPH5Q9H2P9 285 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 RNPEPQ9H4A4 650 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 CDK5RAP2Q96SN8 1893 aa17.64■□□□□ 0.41
PCNX1-209ENST00000554879 NOL4O94818 638 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 MFSD14CQ5VZR4 134 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 SH2D3CQ8N5H7 860 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 CCDC26Q8TAB7 109 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 COG1Q8WTW3 980 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 SNX12Q9UMY4 172 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 MANSC4A6NHS7 340 aaPredicted RBP17.63■□□□□ 0.41
PCNX1-209ENST00000554879 OGTO15294 1046 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 RFX1P22670 979 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 SLC30A9Q6PML9 568 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 SLC47A2Q86VL8 602 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 CCDC105Q8IYK2 499 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 GTPBP10A4D1E9 387 aaKnown RBP17.63■□□□□ 0.41
PCNX1-209ENST00000554879 VPS41P49754 854 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 CDK17Q00537 523 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 MYBPC2Q14324 1141 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 NOA1Q8NC60 698 aaKnown RBP17.63■□□□□ 0.41
PCNX1-209ENST00000554879 AIPL1Q9NZN9 384 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 MYBL2P10244 700 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 ARL10Q8N8L6 244 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 NAP1L3Q99457 506 aaPredicted RBP17.63■□□□□ 0.41
PCNX1-209ENST00000554879 NUP85Q9BW27 656 aa17.63■□□□□ 0.41
PCNX1-209ENST00000554879 PRMT7Q9NVM4 692 aaPredicted RBP17.63■□□□□ 0.41
PCNX1-209ENST00000554879 ASAP2O43150 1006 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 TLR2O60603 784 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 ICAM3P32942 547 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 GJA5P36382 358 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 RGS2P41220 211 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 SLC26A2P50443 739 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 ORC1Q13415 861 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 GLRA4Q5JXX5 417 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 TMEM63BQ5T3F8 832 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 RGMBQ6NW40 437 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 TBC1D1Q86TI0 1168 aaPredicted RBP17.62■□□□□ 0.41
PCNX1-209ENST00000554879 OSMRQ99650 979 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 TTYH3Q9C0H2 523 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 THAP2Q9H0W7 228 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 ADAMTS5Q9UNA0 930 aa17.62■□□□□ 0.41
PCNX1-209ENST00000554879 AGAP1Q9UPQ3 857 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms