RNA–Protein interactions for RNA: ENST00000554843.5

PSMA6-208, Transcript of proteasome subunit alpha 6, humanhuman

TSL 2

Gene PSMA6, Length 655 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA6-208ENST00000554843 BTG3Q14201 252 aaPredicted RBP16.03■□□□□ 0.16
PSMA6-208ENST00000554843 PAN2Q504Q3 1202 aaKnown RBP16.03■□□□□ 0.16
PSMA6-208ENST00000554843 MIIPQ5JXC2 388 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 TDRD10Q5VZ19 366 aaKnown RBP16.03■□□□□ 0.16
PSMA6-208ENST00000554843 KRT39Q6A163 491 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 CHRDL2Q6WN34 429 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 SV2AQ7L0J3 742 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 COLGALT2Q8IYK4 626 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 C1orf127Q8N9H9 656 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 ZNF516Q92618 1163 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 C18orf25Q96B23 403 aaPredicted RBP16.03■□□□□ 0.16
PSMA6-208ENST00000554843 UROC1Q96N76 676 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 POP1Q99575 1024 aaKnown RBP16.03■□□□□ 0.16
PSMA6-208ENST00000554843 ZBED2Q9BTP6 218 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 ITGA11Q9UKX5 1188 aa16.03■□□□□ 0.16
PSMA6-208ENST00000554843 GBF1Q92538 1859 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 A0A1W2PPC1 479 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 B4GALT3O60512 393 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 RPL9P32969 192 aaKnown RBP16.02■□□□□ 0.16
PSMA6-208ENST00000554843 FMO5P49326 533 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 MYL7Q01449 175 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 RNASELQ05823 741 aaKnown RBP16.02■□□□□ 0.16
PSMA6-208ENST00000554843 KCNH2Q12809 1159 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 VWA3BQ502W6 1294 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 FAM109BQ6ICB4 259 aaPredicted RBP16.02■□□□□ 0.16
PSMA6-208ENST00000554843 TRAPPC11Q7Z392 1133 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 CREBRFQ8IUR6 639 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 CXorf38Q8TB03 319 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 DDX27Q96GQ7 796 aaKnown RBP16.02■□□□□ 0.16
PSMA6-208ENST00000554843 FAM84AQ96KN4 292 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 FAM193BQ96PV7 902 aaPredicted RBP16.02■□□□□ 0.16
PSMA6-208ENST00000554843 NDST4Q9H3R1 872 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 NRDE2Q9H7Z3 1164 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 DPP3Q9NY33 737 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 SIX4Q9UIU6 781 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 COQ4Q9Y3A0 265 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 KIAA1671Q9BY89 1806 aa16.02■□□□□ 0.16
PSMA6-208ENST00000554843 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.01■□□□□ 0.15
PSMA6-208ENST00000554843 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.01■□□□□ 0.15
PSMA6-208ENST00000554843 ANO9A1A5B4 782 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 GTPBP10A4D1E9 387 aaKnown RBP16.01■□□□□ 0.15
PSMA6-208ENST00000554843 CASTOR2A6NHX0 329 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 LGALS16A8MUM7 142 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 TMEM189-UBE2V1I3L0A0 370 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 DDHD2O94830 711 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 LAG3P18627 525 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 GUCY2FP51841 1108 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 BIRC3Q13489 604 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 CBWD6Q4V339 395 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 CBWD3Q5JTY5 395 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 CBWD5Q5RIA9 395 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 ZNF280BQ86YH2 543 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 FIBCD1Q8N539 461 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 ZNF560Q96MR9 790 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 CWH43Q9H720 699 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 MMRN2Q9H8L6 949 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 GOLGA2P5Q9HBQ8 144 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 HCSTQ9UBK5 93 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 PCDHA11Q9Y5I1 949 aa16.01■□□□□ 0.15
PSMA6-208ENST00000554843 MRPL42Q9Y6G3 142 aaKnown RBP16.01■□□□□ 0.15
PSMA6-208ENST00000554843 A0A1B0GTH6 734 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 TULP1O00294 542 aaPredicted RBP16■□□□□ 0.15
PSMA6-208ENST00000554843 PODXLO00592 558 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 PIRO00625 290 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 ZC3H11AO75152 810 aaKnown RBP eCLIP16■□□□□ 0.15
PSMA6-208ENST00000554843 STAU1O95793 577 aaKnown RBP16■□□□□ 0.15
PSMA6-208ENST00000554843 ITGB3P05106 788 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 LINC00271P0C7V0 271 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 PAX3P23760 479 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 POLR2BP30876 1174 aaKnown RBP16■□□□□ 0.15
PSMA6-208ENST00000554843 PNPLA4P41247 253 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 RBP5P82980 135 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 FANCCQ00597 558 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 CETN1Q12798 172 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 UVSSAQ2YD98 709 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 EPC2Q52LR7 807 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 PRPF38BQ5VTL8 546 aaKnown RBP16■□□□□ 0.15
PSMA6-208ENST00000554843 C9orf57Q5W0N0 161 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 SARM1Q6SZW1 724 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 LRRC52Q8N7C0 313 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 FBXL13Q8NEE6 735 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 TAS1R2Q8TE23 839 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 VRTNQ9H8Y1 702 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 RWDD3Q9Y3V2 267 aa16■□□□□ 0.15
PSMA6-208ENST00000554843 GRXCR1A8MXD5 290 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 PHACTR2O75167 634 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 VNN1O95497 513 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 SERPINC1P01008 464 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 HLA-DRAP01903 254 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 PIK3CAP42336 1068 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 SLC11A1P49279 550 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 CLCNKBP51801 687 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 TRPC3Q13507 836 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 NCOA4Q13772 614 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 RAB30Q15771 203 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 UPP1Q16831 310 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 FILIP1LQ4L180 1135 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 FKBP15Q5T1M5 1219 aa15.99■□□□□ 0.15
PSMA6-208ENST00000554843 CLP1Q92989 425 aaKnown RBP15.99■□□□□ 0.15
PSMA6-208ENST00000554843 VPS16Q9H269 839 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms