RNA–Protein interactions for RNA: ENST00000554677.1

MTHFD1-207, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 783 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-207ENST00000554677 DDX23Q9BUQ8 820 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-207ENST00000554677 CCDC94Q9BW85 323 aaPredicted RBP13.4□□□□□ -0.26
MTHFD1-207ENST00000554677 MRPL4Q9BYD3 311 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-207ENST00000554677 FOXQ1Q9C009 403 aa13.4□□□□□ -0.26
MTHFD1-207ENST00000554677 KCNH3Q9ULD8 1083 aa13.4□□□□□ -0.26
MTHFD1-207ENST00000554677 POLIQ9UNA4 740 aa13.4□□□□□ -0.26
MTHFD1-207ENST00000554677 SIT1Q9Y3P8 196 aa13.4□□□□□ -0.26
MTHFD1-207ENST00000554677 RBM19Q9Y4C8 960 aaKnown RBP13.4□□□□□ -0.26
MTHFD1-207ENST00000554677 PATJQ8NI35 1801 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 CEP250Q9BV73 2442 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 ARHGEF37A1IGU5 675 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 PODXLO00592 558 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 NRG2O14511 850 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 SLC16A4O15374 487 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 TRAPPC3O43617 180 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 MCF2P10911 925 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 GUCY2CP25092 1073 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 DMP1Q13316 513 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 SLC5A9Q2M3M2 681 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 SLC10A6Q3KNW5 377 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 ZNF568Q3ZCX4 644 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 SPECC1Q5M775 1068 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 VARS2Q5ST30 1063 aaKnown RBP13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 KRT79Q5XKE5 535 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 DTHD1Q6ZMT9 781 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 MAML2Q8IZL2 1156 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 ADSSL1Q8N142 457 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 TMEM161BQ8NDZ6 487 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 ZNF461Q8TAF7 563 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 ACAP3Q96P50 834 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 RAB34Q9BZG1 259 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 PLA2G2FQ9BZM2 168 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 HAPLN2Q9GZV7 340 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 C17orf75Q9HAS0 396 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 KMT5AQ9NQR1 393 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 CNTN3Q9P232 1028 aa13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 MTF2Q9Y483 593 aaPredicted RBP13.39□□□□□ -0.27
MTHFD1-207ENST00000554677 WDR27A2RRH5 827 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 SHISA7A6NL88 538 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 SEC24AO95486 1093 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 RHOP08100 348 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 YARSP54577 528 aaKnown RBP13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 ATP2C1P98194 919 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 ROR1Q01973 937 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 SNW1Q13573 536 aaKnown RBP13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 PABPC1LQ4VXU2 614 aaKnown RBP13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 SEZ6Q53EL9 994 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 SLC44A4Q53GD3 710 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 MPZL3Q6UWV2 235 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 MTSS1LQ765P7 747 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 APBB1IPQ7Z5R6 666 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 SYT2Q8N9I0 419 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 PJA1Q8NG27 643 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 SPIRE2Q8WWL2 714 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 ING5Q8WYH8 240 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 DRC1Q96MC2 740 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 KXD1Q9BQD3 176 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 AVENQ9NQS1 362 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 TOPORSQ9NS56 1045 aaPredicted RBP13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 SLC38A7Q9NVC3 462 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 SCN1AP35498 2009 aa13.38□□□□□ -0.27
MTHFD1-207ENST00000554677 SYN3O14994 580 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 SP9P0CG40 484 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 MAPTP10636 758 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 PLS3P13797 630 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 ATF2P15336 505 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 RPL9P32969 192 aaKnown RBP13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 SLC12A3P55017 1021 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 RAD51AP2Q09MP3 1159 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 ARSHQ5FYA8 562 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 PRSS36Q5K4E3 855 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 C1orf210Q8IVY1 113 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 LRRC15Q8TF66 581 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 MCRS1Q96EZ8 462 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 SUSD3Q96L08 255 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 PLIN2Q99541 437 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 TCHPQ9BT92 498 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 TIPINQ9BVW5 301 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 FBXL5Q9UKA1 691 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 R4GN57 208 aa13.37□□□□□ -0.27
MTHFD1-207ENST00000554677 NPHP3-ACAD11A0A0J9YXS1 232 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 KANSL1LA0AUZ9 987 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 TOM1L1O75674 476 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 CEBPBP17676 345 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 PTPN2P17706 415 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 RFX1P22670 979 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 CCR2P41597 374 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 MCL1Q07820 350 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 FZD5Q13467 585 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 MLF2Q15773 248 aaPredicted RBP13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 ZBTB6Q15916 424 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 RILPL1Q5EBL4 403 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 TANGO2Q6ICL3 276 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 TCEAL8Q8IYN2 117 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 SPOCK2Q92563 424 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 KCNN1Q92952 543 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 TCEAL4Q96EI5 215 aa13.36□□□□□ -0.27
MTHFD1-207ENST00000554677 SHDQ96IW2 340 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms