RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 PLAAQ9Y263 795 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 ZNF541Q9H0D2 1346 aa3.7□□□□□ -1.82
SEC23A-207ENST00000554615 SCN1AP35498 2009 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 TESPA1A2RU30 521 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 GOLGA6CA6NDK9 693 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 SOWAHBA6NEL2 793 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 CASQ2O14958 399 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 SLC22A2O15244 555 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 NCK2O43639 380 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 BUB1O43683 1085 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 LIASO43766 372 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 MSCO60682 206 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 MAFO75444 373 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 SUN1O94901 812 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC172P0C7W6 258 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 GOLGA6DP0CG33 693 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 CETPP11597 493 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 CYP11B1P15538 503 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 EIF4BP23588 611 aaKnown RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 HOXC13P31276 330 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 PCK1P35558 622 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 NAMPTP43490 491 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ASPAP45381 313 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 WNT7BP56706 349 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 NCALDP61601 193 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ICA1Q05084 483 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 NAB1Q13506 487 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 MAPK6Q16659 721 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 UGCGQ16739 394 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 FAM98CQ17RN3 349 aaKnown RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 SHROOM1Q2M3G4 852 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 UBAP2Q5T6F2 1119 aaKnown RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 CCDC62Q6P9F0 684 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 C4orf22Q6V702 233 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ZNF534Q76KX8 674 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 MCF2L2Q86YR7 1114 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 RTKN2Q8IZC4 609 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 MPNDQ8N594 471 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ARFGAP2Q8N6H7 521 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 BANK1Q8NDB2 785 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 MCUQ8NE86 351 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 SHCBP1Q8NEM2 672 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 NUP133Q8WUM0 1156 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 DCAKDQ8WVC6 231 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ZKSCAN4Q969J2 545 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 SLC7A6OSQ96CW6 309 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 PGAP3Q96FM1 320 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 MS4A14Q96JA4 679 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 GORASP1Q9BQQ3 440 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 FRMD8Q9BZ67 464 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 DPH5Q9H2P9 285 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 BCAS3Q9H6U6 928 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 USP40Q9NVE5 1235 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 GOLGA6AQ9NYA3 693 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 CPSF3Q9UKF6 684 aaKnown RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 PCDHB13Q9Y5F0 798 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 RAD54BQ9Y620 910 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 NUMBLQ9Y6R0 609 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 FRMPD2Q68DX3 1309 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 PLXND1Q9Y4D7 1925 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 COL5A1P20908 1838 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ZNF862O60290 1169 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 NPTXRO95502 500 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ASS1P00966 412 aaKnown RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 PFKMP08237 780 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ARP10275 920 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 XRCC5P13010 732 aaKnown RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ITGA4P13612 1032 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 STAT2P52630 851 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 PSMC1P62191 440 aaKnown RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ELF3P78545 371 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 NRG1Q02297 640 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 CYP27A1Q02318 531 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 RASSF7Q02833 373 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ZNF33AQ06730 810 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 KCNA1Q09470 495 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 GRIK3Q13003 919 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 SEMA3BQ13214 749 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 DRAP1Q14919 205 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 PTPN21Q16825 1174 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 WDR72Q3MJ13 1102 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 CERKLQ49MI3 558 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 C8orf74Q6P047 294 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 MAATS1Q7Z4T9 603 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 TRABD2AQ86V40 505 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 FAM186BQ8IYM0 893 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 PRCCQ92733 491 aaPredicted RBP3.69□□□□□ -1.82
SEC23A-207ENST00000554615 ACSBG1Q96GR2 724 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 SEC16BQ96JE7 1060 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 NLRP4Q96MN2 994 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 EHMT1Q9H9B1 1298 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 SENP1Q9P0U3 644 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 GUCA1BQ9UMX6 200 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 CXorf51AA0A1B0GTR3 108 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 A0A1B0GUA9 196 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 hCG_1642624A0A1W2PR95 340 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 MOXD2PA6NHM9 499 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 CCT8L1PA6NM43 557 aa3.69□□□□□ -1.82
SEC23A-207ENST00000554615 C9IYK1 514 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms