RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 TAS1R3Q7RTX0 852 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 C12orf76Q8N812 135 aaPredicted RBP13.55□□□□□ -0.24
SHMT2-214ENST00000554604 SPC24Q8NBT2 197 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 TMEM161BQ8NDZ6 487 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 HASPINQ8TF76 798 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 RAD54LQ92698 747 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 BICD1Q96G01 975 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 B3GALT6Q96L58 329 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 FBXL18Q96ME1 805 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 GSDMAQ96QA5 445 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 PAAF1Q9BRP4 392 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 GPR62Q9BZJ7 368 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 ZHX3Q9H4I2 956 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 MUTYHQ9UIF7 546 aa13.55□□□□□ -0.24
SHMT2-214ENST00000554604 TEX28O15482 410 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 GPR37L1O60883 481 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 TBCAO75347 108 aaKnown RBP13.54□□□□□ -0.24
SHMT2-214ENST00000554604 TOM1L1O75674 476 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 GLUD1P00367 558 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 MAPTP10636 758 aaKnown RBP13.54□□□□□ -0.24
SHMT2-214ENST00000554604 MCF2P10911 925 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 BMP6P22004 513 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 SP100P23497 879 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-214ENST00000554604 GRM5P41594 1212 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 CREMQ03060 361 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 DPYDQ12882 1025 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 KIAA0319Q5VV43 1072 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 ISM2Q6H9L7 571 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 TMC5Q6UXY8 1006 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 DRC7Q8IY82 874 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 RNF168Q8IYW5 571 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-214ENST00000554604 MYCT1Q8N699 235 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 CEP120Q8N960 986 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 RIN2Q8WYP3 895 aaPredicted RBP13.54□□□□□ -0.24
SHMT2-214ENST00000554604 LARP4BQ92615 738 aaKnown RBP13.54□□□□□ -0.24
SHMT2-214ENST00000554604 ACAP3Q96P50 834 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 REEP2Q9BRK0 252 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 LRFN3Q9BTN0 628 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 CXCL16Q9H2A7 254 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 SFXN1Q9H9B4 322 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 PTPRHQ9HD43 1115 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.54□□□□□ -0.24
SHMT2-214ENST00000554604 CHST7Q9NS84 486 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 BLOC1S4Q9NUP1 217 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 DPP7Q9UHL4 492 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 CDH22Q9UJ99 828 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 NR2E1Q9Y466 385 aa13.54□□□□□ -0.24
SHMT2-214ENST00000554604 CLDN3O15551 220 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 KIF4AO95239 1232 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 EFEMP2O95967 443 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 WEE2P0C1S8 567 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 ERCC5P28715 1186 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-214ENST00000554604 ELAVL2Q12926 359 aaKnown RBP13.53□□□□□ -0.24
SHMT2-214ENST00000554604 NOLC1Q14978 699 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHMT2-214ENST00000554604 NAB2Q15742 525 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 HERC4Q5GLZ8 1057 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-214ENST00000554604 FAM171A1Q5VUB5 890 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 HAUS6Q7Z4H7 955 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 CEP57Q86XR8 500 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 GLYCTKQ8IVS8 523 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 GRAMD1CQ8IYS0 662 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 ENOX1Q8TC92 643 aaKnown RBP13.53□□□□□ -0.24
SHMT2-214ENST00000554604 ZBTB45Q96K62 511 aaPredicted RBP13.53□□□□□ -0.24
SHMT2-214ENST00000554604 TTPALQ9BTX7 342 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 POMKQ9H5K3 350 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 PARVGQ9HBI0 331 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 RXFP1Q9HBX9 757 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 MAN1C1Q9NR34 630 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 TECTAO75443 2155 aa13.53□□□□□ -0.24
SHMT2-214ENST00000554604 DOCK6Q96HP0 2047 aa13.52□□□□□ -0.24
SHMT2-214ENST00000554604 SMIM28A0A1B0GU29 152 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 K7ENM7 598 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 B3GAT3O94766 335 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 MYL1P05976 194 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 SCP2P22307 547 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 PROZP22891 400 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 NCKAP1LP55160 1127 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 RRAGBQ5VZM2 374 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 ZPBP2Q6X784 338 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 CCDC186Q7Z3E2 898 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 PALB2Q86YC2 1186 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 GPR65Q8IYL9 337 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 LRRC15Q8TF66 581 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 UROC1Q96N76 676 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 PPP1R10Q96QC0 940 aaKnown RBP13.52□□□□□ -0.25
SHMT2-214ENST00000554604 HSD3B7Q9H2F3 369 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 KCNF1Q9H3M0 494 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 CUEDC2Q9H467 287 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 MAGEF1Q9HAY2 307 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 C11orf16Q9NQ32 467 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 SLC38A7Q9NVC3 462 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 FNIP2Q9P278 1114 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 IMPACTQ9P2X3 320 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 STK17AQ9UEE5 414 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 DENND4AQ7Z401 1863 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 ZDBF2Q9HCK1 2354 aa13.52□□□□□ -0.25
SHMT2-214ENST00000554604 PRR33A8MZF0 331 aa13.51□□□□□ -0.25
SHMT2-214ENST00000554604 ABLIM1O14639 778 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms