RNA–Protein interactions for RNA: ENST00000554429.5

PRPF39-206, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 2,977 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-206ENST00000554429 HSPA4LO95757 839 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ZSCAN22P10073 491 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ATP6V1B1P15313 513 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TAL1P17542 331 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TRIM21P19474 475 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 YARSP54577 528 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 DMPKQ09013 629 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 KLHL30Q0D2K2 578 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TBX2Q13207 712 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 LAPTM5Q13571 262 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ADGRE1Q14246 886 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SYCP1Q15431 976 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TCEA2Q15560 299 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 MUM1L1Q5H9M0 696 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SLC9C2Q5TAH2 1124 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 KAZNQ674X7 775 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 HEATR6Q6AI08 1181 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TAPT1Q6NXT6 567 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SDCCAG8Q86SQ7 713 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC116Q8IYX3 515 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 MYCT1Q8N699 235 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 RNF214Q8ND24 703 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 IL17RDQ8NFM7 739 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 C1orf216Q8TAB5 229 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SPATA18Q8TC71 538 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SGCDQ92629 289 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ARL8AQ96BM9 186 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TNIP3Q96KP6 325 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 GLT1D1Q96MS3 346 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TIGD1Q96MW7 591 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 FSD1Q9BTV5 496 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 NAA15Q9BXJ9 866 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 OSBPL3Q9H4L5 887 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CAAP1Q9H8G2 361 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ZNF287Q9HBT7 754 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TBC1D22BQ9NU19 505 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PAG1Q9NWQ8 432 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 MCM9Q9NXL9 1143 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TRHDEQ9UKU6 1024 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 YBX2Q9Y2T7 364 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 LUC7L2Q9Y383 392 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PCDHB9Q9Y5E1 797 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 KIAA1671Q9BY89 1806 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 WDR19Q8NEZ3 1342 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 FSD2A1L4K1 749 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 FAM221AA4D161 298 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 MYADML2A6NDP7 307 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 RCCD1A6NED2 376 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SFI1A8K8P3 1242 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TULP2O00295 520 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 GABRDO14764 452 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ADCY6O43306 1168 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 EFCAB14O75071 495 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TBCAO75347 108 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 IDH1O75874 414 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 LARGE1O95461 756 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ADCY5O95622 1261 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 NDUFB10O96000 172 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 FGBP02675 491 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ASGR1P07306 291 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 VIMP08670 466 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SUPT20HL2P0C7V6 817 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 HARSP12081 509 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PRLRP16471 622 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PMLP29590 882 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 NPTX2P47972 431 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 MAN2A2P49641 1150 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 WDR4P57081 412 aaKnown RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 C21orf58P58505 322 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 AP3B2Q13367 1082 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PPP2R5DQ14738 602 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ALX1Q15699 326 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SLC14A2Q15849 920 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SWI5Q1ZZU3 235 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 DUSP28Q4G0W2 176 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ARHGAP29Q52LW3 1261 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SMUG1Q53HV7 270 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 SPDYCQ5MJ68 293 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PRAMEF19Q5SWL8 479 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 HECTD3Q5T447 861 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 RNF19BQ6ZMZ0 732 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC149Q6ZUS6 474 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CENPQQ7L2Z9 268 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ARMCX2Q7L311 632 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TAOK1Q7L7X3 1001 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 AACSQ86V21 672 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 GAS2L3Q86XJ1 694 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PASD1Q8IV76 773 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 CCDC144CPQ8IYA2 1237 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 FAM186BQ8IYM0 893 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 PDCL2Q8N4E4 241 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 FAM169BQ8N8A8 192 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 TPCN2Q8NHX9 752 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 DCAF4Q8WV16 495 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 KCTD13Q8WZ19 329 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 KCNN1Q92952 543 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 UHRF1Q96T88 793 aaPredicted RBP2.94□□□□□ -1.94
PRPF39-206ENST00000554429 APOL5Q9BWW9 433 aa2.94□□□□□ -1.94
PRPF39-206ENST00000554429 NIF3L1Q9GZT8 377 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms