RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TREML2Q5T2D2 321 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 PDILTQ8N807 584 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 MICAL1Q8TDZ2 1067 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 STAG1Q8WVM7 1258 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 SOCS4Q8WXH5 440 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 TRIB2Q92519 343 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 GUCD1Q96NT3 240 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 LBHD1Q9BQE6 289 aaPredicted RBP6.53□□□□□ -1.36
VPS33B-203ENST00000554264 NUP58Q9BVL2 599 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 HAUS4Q9H6D7 363 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 MAGEF1Q9HAY2 307 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 LY9Q9HBG7 655 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 AS3MTQ9HBK9 375 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 CHST7Q9NS84 486 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 SLAMF8Q9P0V8 285 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 MORF4L1Q9UBU8 362 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 SUSD2Q9UGT4 822 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 FBXO2Q9UK22 296 aaPredicted RBP6.53□□□□□ -1.36
VPS33B-203ENST00000554264 CTNND2Q9UQB3 1225 aa6.53□□□□□ -1.36
VPS33B-203ENST00000554264 COL2A1P02458 1487 aaPredicted RBP6.53□□□□□ -1.36
VPS33B-203ENST00000554264 A0A0C4DFX4 3053 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 A0A0U1RQG5 324 aaPredicted RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 A0A1W2PQC6 194 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 ERICH4A6NGS2 130 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 DDTLA6NHG4 134 aaPredicted RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 IPO7O95373 1038 aaKnown RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 PAPLNO95428 1278 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 ITGB5P18084 799 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 CD247P20963 164 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 EEF1GP26641 437 aaKnown RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 MARCKSP29966 332 aaPredicted RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 PBX1P40424 430 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 USP8P40818 1118 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 TNNT3P45378 269 aaPredicted RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 HMGCS2P54868 508 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 ERVFC1P60507 584 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 KRT83P78385 493 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 IRX3P78415 501 aaPredicted RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 SPP2Q13103 211 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 PICALMQ13492 652 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 STIM1Q13586 685 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 WTAPQ15007 396 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 LONRF3Q496Y0 759 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 AKNAD1Q5T1N1 836 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 SLC9C2Q5TAH2 1124 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 ZPBP2Q6X784 338 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 GBP6Q6ZN66 633 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 MFSD6Q6ZSS7 791 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 SPATS2Q86XZ4 545 aaKnown RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 DZIP1Q86YF9 867 aaKnown RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 DIS3L2Q8IYB7 885 aaKnown RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 ZNF655Q8N720 491 aaPredicted RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 IGSF22Q8N9C0 903 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 IGDCC4Q8TDY8 1250 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 CCDC47Q96A33 483 aaKnown RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 ALPK1Q96QP1 1244 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 FOXP3Q9BZS1 431 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 TSGA10Q9BZW7 698 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 NAPBQ9H115 298 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 ASCC2Q9H1I8 757 aaPredicted RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 GP6Q9HCN6 339 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 ADD3Q9UEY8 706 aaKnown RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 PRKAG3Q9UGI9 489 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 LIMA1Q9UHB6 759 aaKnown RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 RWDD2AQ9UIY3 292 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 ADAM21Q9UKJ8 722 aa6.52□□□□□ -1.37
VPS33B-203ENST00000554264 DDX60LQ5H9U9 1706 aaKnown RBP6.52□□□□□ -1.37
VPS33B-203ENST00000554264 PDS5AQ29RF7 1337 aaKnown RBP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 ATXN2Q99700 1313 aaKnown RBP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 MYH8P13535 1937 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 TMEM82A0PJX8 343 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 IFIT3O14879 490 aaKnown RBP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 FOXP2O15409 715 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 DDAH1O94760 285 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 PDE6AP16499 860 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 MAPK4P31152 587 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 KRT2P35908 639 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 RGS2P41220 211 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 BTDP43251 543 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 SLC7A5Q01650 507 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 APBA1Q02410 837 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 CACNB2Q08289 660 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 LRRC26Q2I0M4 334 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 BBS9Q3SYG4 887 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 BEND6Q5SZJ8 279 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 FYB2Q5VWT5 728 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 ARL6IP4Q66PJ3 421 aaKnown RBP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 SPTY2D1Q68D10 685 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 SRLQ86TD4 932 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 MICU3Q86XE3 530 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 FAM114A1Q8IWE2 563 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 GPRC5AQ8NFJ5 357 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 MAFAQ8NHW3 353 aaPredicted RBP6.51□□□□□ -1.37
VPS33B-203ENST00000554264 PPM1EQ8WY54 764 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 DHX58Q96C10 678 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 WDR24Q96S15 920 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 APBA2Q99767 749 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 G6PC3Q9BUM1 346 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 SLC26A6Q9BXS9 759 aa6.51□□□□□ -1.37
VPS33B-203ENST00000554264 KLHL25Q9H0H3 589 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms