RNA–Protein interactions for RNA: ENST00000554180.5

TDP1-209, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 910 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-209ENST00000554180 ITGA4P13612 1032 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 ANXA13P27216 316 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 MFAP3P55082 362 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 NOP14P78316 857 aaKnown RBP8.24□□□□□ -1.09
TDP1-209ENST00000554180 FAM189BP81408 668 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 CCZ1BP86790 482 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 CCZ1P86791 482 aaPredicted RBP8.24□□□□□ -1.09
TDP1-209ENST00000554180 TRPC3Q13507 836 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 RAPGEF1Q13905 1077 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 ZBTB6Q15916 424 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 LRRC26Q2I0M4 334 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 SGSM1Q2NKQ1 1148 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 SFMBT2Q5VUG0 894 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 IQCEQ6IPM2 695 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 PHLDB3Q6NSJ2 640 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 CYP26C1Q6V0L0 522 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 SLC24A5Q71RS6 500 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 RRAGAQ7L523 313 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 TMTC1Q8IUR5 882 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 TMEM139Q8IV31 216 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 LRRC52Q8N7C0 313 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 C1orf127Q8N9H9 656 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 BEST2Q8NFU1 509 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 CXorf38Q8TB03 319 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 HELQQ8TDG4 1101 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 SEPT8Q92599 483 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 KIF12Q96FN5 646 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 BAG1Q99933 345 aaPredicted RBP8.24□□□□□ -1.09
TDP1-209ENST00000554180 OSBPL7Q9BZF2 842 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 NIF3L1Q9GZT8 377 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 XYLT2Q9H1B5 865 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 WNT8AQ9H1J5 351 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 KCNF1Q9H3M0 494 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 ELAC1Q9H777 363 aaKnown RBP8.24□□□□□ -1.09
TDP1-209ENST00000554180 NLRC4Q9NPP4 1024 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 TMEM39AQ9NV64 488 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 DPP3Q9NY33 737 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 AIPL1Q9NZN9 384 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 PARP2Q9UGN5 583 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 DNAJC12Q9UKB3 198 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 ZKSCAN5Q9Y2L8 839 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 R3HCC1Q9Y3T6 440 aaKnown RBP8.24□□□□□ -1.09
TDP1-209ENST00000554180 HES2Q9Y543 173 aa8.24□□□□□ -1.09
TDP1-209ENST00000554180 BZW2Q9Y6E2 419 aaKnown RBP8.24□□□□□ -1.09
TDP1-209ENST00000554180 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.24□□□□□ -1.09
TDP1-209ENST00000554180 TANC1Q9C0D5 1861 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 SMIM28A0A1B0GU29 152 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 SSU72P8A0A1W2PR75 194 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 KIAA0355O15063 1070 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 PFKMP08237 780 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 P4HA1P13674 534 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 FERP16591 822 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 ATF7P17544 494 aaPredicted RBP8.23□□□□□ -1.09
TDP1-209ENST00000554180 AKAP5P24588 427 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 SOX5P35711 763 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 PNPLA4P41247 253 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 PRKCIP41743 596 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 STAT1P42224 750 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 RBP5P82980 135 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 APBA1Q02410 837 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 LRMPQ12912 555 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 MYO1EQ12965 1108 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 DRAP1Q14919 205 aaPredicted RBP8.23□□□□□ -1.09
TDP1-209ENST00000554180 GPNMBQ14956 572 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 ZNF699Q32M78 642 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 WDR59Q6PJI9 974 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 AGMOQ6ZNB7 445 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 ZNF598Q86UK7 904 aaKnown RBP8.23□□□□□ -1.09
TDP1-209ENST00000554180 ZSCAN30Q86W11 494 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 ECHDC2Q86YB7 292 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 ARHGEF19Q8IW93 802 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 CCDC170Q8IYT3 715 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 PPM1KQ8N3J5 372 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 SHC3Q92529 594 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 ZMAT2Q96NC0 199 aaKnown RBP8.23□□□□□ -1.09
TDP1-209ENST00000554180 PPP1R10Q96QC0 940 aaKnown RBP8.23□□□□□ -1.09
TDP1-209ENST00000554180 RPS6KC1Q96S38 1066 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 APOL6Q9BWW8 343 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 PPP1R12CQ9BZL4 782 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 RNF39Q9H2S5 420 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 RSAD1Q9HA92 442 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 UBE2TQ9NPD8 197 aaPredicted RBP8.23□□□□□ -1.09
TDP1-209ENST00000554180 SIX4Q9UIU6 781 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 UMODL1Q5DID0 1318 aa8.23□□□□□ -1.09
TDP1-209ENST00000554180 CITO14578 2027 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 ANO9A1A5B4 782 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 ARL5CA6NH57 179 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 TULP1O00294 542 aaPredicted RBP8.22□□□□□ -1.09
TDP1-209ENST00000554180 PTGESO14684 152 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 HOXA2O43364 376 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 EFCAB14O75071 495 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 LRRN2O75325 713 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 GFPT2O94808 682 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 TIMP1P01033 207 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 CST3P01034 146 aaPredicted RBP8.22□□□□□ -1.09
TDP1-209ENST00000554180 ITGB3P05106 788 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 SERPING1P05155 500 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 THP07101 528 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 PAX3P23760 479 aa8.22□□□□□ -1.09
TDP1-209ENST00000554180 LRPAP1P30533 357 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms