RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 FEZF2Q8TBJ5 459 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 SPPL3Q8TCT6 385 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ATRIPQ8WXE1 791 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 LARP4BQ92615 738 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 DDX12PQ92771 950 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 HAS1Q92839 578 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 RIPOR3Q96MK2 946 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MRPL9Q9BYD2 267 aaKnown RBP2.72□□□□□ -1.97
PRPF39-205ENST00000554081 MIOSQ9NXC5 875 aa2.72□□□□□ -1.97
PRPF39-205ENST00000554081 ROBO3Q96MS0 1386 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 IGSF9BQ9UPX0 1349 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 AKAP6Q13023 2319 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TTC36A6NLP5 189 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 A8MXQ7 604 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 INPPL1O15357 1258 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 BAIAP3O94812 1187 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TNNC2P02585 160 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 ITGB3P05106 788 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 FGRP09769 529 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 ALADP13716 330 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TKTP29401 623 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 POLR2BP30876 1174 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 KRT9P35527 623 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 SOX9P48436 509 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 SARSP49591 514 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TNNC1P63316 161 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 GPC5P78333 572 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 CYP4F8P98187 520 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 AMPD3Q01432 767 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TSPY1Q01534 308 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 KCNB1Q14721 858 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 ARHGAP44Q17R89 818 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 POM121L1PQ3SYA9 428 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 PABPC1LQ4VXU2 614 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 CT47A1Q5JQC4 288 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 MARCH8Q5T0T0 291 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 OVOS1Q6IE37 1185 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 SLC27A1Q6PCB7 646 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 FOXR1Q6PIV2 292 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 KRBA2Q6ZNG9 492 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 STXBP4Q6ZWJ1 553 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 SND1Q7KZF4 910 aaKnown RBP eCLIP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 FAM124AQ86V42 546 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 CCDC33Q8N5R6 958 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 CSGALNACT1Q8TDX6 532 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 UBXN4Q92575 508 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 APBB2Q92870 758 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 KHSRPQ92945 711 aaKnown RBP eCLIP2.71□□□□□ -1.985e-10■■■□□ 16.6
PRPF39-205ENST00000554081 TBC1D32Q96NH3 1257 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 NAP1L4Q99733 375 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 MYOCQ99972 504 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 REEP2Q9BRK0 252 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TTPALQ9BTX7 342 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 PHF20Q9BVI0 1012 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 CIPCQ9C0C6 399 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 NT5C3AQ9H0P0 336 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 POMKQ9H5K3 350 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 RBM12Q9NTZ6 932 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 PRMT7Q9NVM4 692 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 STIM2Q9P246 746 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 SERTAD1Q9UHV2 236 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 ADAM28Q9UKQ2 775 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 AGO2Q9UKV8 859 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 KIAA1551Q9HCM1 1747 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 DOCK6Q96HP0 2047 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 IGLV3-22A0A075B6J6 115 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 A0A0U1RQF3 1178 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 hCG_1984214I3L0E3 225 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 PODXLO00592 558 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 CYB561D2O14569 222 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TRDMT1O14717 391 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 XPOTO43592 962 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 XYLBO75191 536 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 PSMD10O75832 226 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 DGKIO75912 1065 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 PARNO95453 639 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 TRIM21P19474 475 aaKnown RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 DNAJB1P25685 340 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 ANXA13P27216 316 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 GJC1P36383 396 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 MCM2P49736 904 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 CDH8P55286 799 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 HYAL1Q12794 435 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 BIRC2Q13490 618 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 NOLC1Q14978 699 aaKnown RBP eCLIP2.71□□□□□ -1.985e-32■■■■■ 47.5
PRPF39-205ENST00000554081 PTPN21Q16825 1174 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 C8orf34Q49A92 452 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 ACCSLQ4AC99 568 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 CLLU1OSQ5K130 101 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 ZBTB41Q5SVQ8 909 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 PRAMEF14Q5SWL7 426 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 MCTP2Q6DN12 878 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 GALNT17Q6IS24 598 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 THSD4Q6ZMP0 1018 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 AGMOQ6ZNB7 445 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 HFE2Q6ZVN8 426 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 SPATA2LQ8IUW3 424 aaPredicted RBP2.71□□□□□ -1.98
PRPF39-205ENST00000554081 THEM5Q8N1Q8 247 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 PPM1KQ8N3J5 372 aa2.71□□□□□ -1.98
PRPF39-205ENST00000554081 DCLK2Q8N568 766 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms