RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 MBTD1Q05BQ5 628 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 ELAVL2Q12926 359 aaKnown RBP8.51□□□□□ -1.05
ABCD4-220ENST00000553998 TUSC3Q13454 348 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 PPP2R5DQ14738 602 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 EMC2Q15006 297 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 PSMD5Q16401 504 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 PABPC1LQ4VXU2 614 aaKnown RBP8.51□□□□□ -1.05
ABCD4-220ENST00000553998 AXDND1Q5T1B0 1012 aaPredicted RBP8.51□□□□□ -1.05
ABCD4-220ENST00000553998 HAUS3Q68CZ6 603 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 SLC27A1Q6PCB7 646 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 PRR23CQ6ZRP0 262 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 OTUD6AQ7L8S5 288 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 MAP4K3Q8IVH8 894 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 KCTD17Q8N5Z5 321 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 IGSF22Q8N9C0 903 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 LINC00301Q8NCQ3 95 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 CPB2Q96IY4 423 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 CHAMP1Q96JM3 812 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 AK8Q96MA6 479 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 PAAF1Q9BRP4 392 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 HEBP1Q9NRV9 189 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 HCFC1R1Q9NWW0 138 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 ANGPTL2Q9UKU9 493 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 RAB23Q9ULC3 237 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 CLIC4Q9Y696 253 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 ATRXP46100 2492 aa8.51□□□□□ -1.05
ABCD4-220ENST00000553998 TDRD15B5MCY1 1934 aaKnown RBP8.5□□□□□ -1.05
ABCD4-220ENST00000553998 ZZEF1O43149 2961 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 COL4A3Q01955 1670 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.5□□□□□ -1.05
ABCD4-220ENST00000553998 ARHGEF37A1IGU5 675 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 SLC26A4O43511 780 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 HRO43593 1189 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 PPP6R2O75170 966 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 LYPLA2O95372 231 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 MUTP22033 750 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 FGFR3P22607 806 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 AKAP5P24588 427 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 ARL2P36404 184 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 LONP1P36776 959 aaKnown RBP8.5□□□□□ -1.05
ABCD4-220ENST00000553998 CCR3P51677 355 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 KRT85P78386 507 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 TFDP1Q14186 410 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 STK38Q15208 465 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 SLC5A9Q2M3M2 681 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 PRSS36Q5K4E3 855 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 FAM171A1Q5VUB5 890 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 NCAPH2Q6IBW4 605 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 TANGO2Q6ICL3 276 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.5□□□□□ -1.05
ABCD4-220ENST00000553998 PPP4R3CPQ6ZMV5 832 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 SLC7A14Q8TBB6 771 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 MCRS1Q96EZ8 462 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 HSD17B14Q9BPX1 270 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 EIF2AK1Q9BQI3 630 aaKnown RBP8.5□□□□□ -1.05
ABCD4-220ENST00000553998 TRIM6Q9C030 488 aaPredicted RBP8.5□□□□□ -1.05
ABCD4-220ENST00000553998 ZSWIM4Q9H7M6 989 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 TUFT1Q9NNX1 390 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 MTRRQ9UBK8 725 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 MRPS23Q9Y3D9 190 aaKnown RBP8.5□□□□□ -1.05
ABCD4-220ENST00000553998 SRPRBQ9Y5M8 271 aaKnown RBP8.5□□□□□ -1.05
ABCD4-220ENST00000553998 BACE2Q9Y5Z0 518 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 SPEGQ15772 3267 aa8.5□□□□□ -1.05
ABCD4-220ENST00000553998 CEP295Q9C0D2 2601 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 BAHCC1Q9P281 2608 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 TMEM189-UBE2V1I3L0A0 370 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 INO80B-WBP1J3KQ70 363 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 PTGESO14684 152 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 ZBTB39O15060 712 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 SPTLC2O15270 562 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 B4GALT5O43286 388 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 GDF9O60383 454 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 ABLIM3O94929 683 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 SLITRK3O94933 977 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 KIF4AO95239 1232 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 RHOP08100 348 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 CHRNB1P11230 501 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 XRCC6P12956 609 aaKnown RBP eCLIP8.49□□□□□ -1.05
ABCD4-220ENST00000553998 PTPN2P17706 415 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 RPA1P27694 616 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 HOXA6P31267 233 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 OR1D2P34982 312 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 CXCL12P48061 93 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 CEBPZQ03701 1054 aaKnown RBP8.49□□□□□ -1.05
ABCD4-220ENST00000553998 DNM1Q05193 864 aaKnown RBP8.49□□□□□ -1.05
ABCD4-220ENST00000553998 CAPSQ13938 189 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 GAS6Q14393 721 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 IL17AQ16552 155 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 KRT79Q5XKE5 535 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 CD300LGQ6UXG3 332 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 SPEM1Q8N4L4 309 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 KRI1Q8N9T8 703 aaKnown RBP8.49□□□□□ -1.05
ABCD4-220ENST00000553998 ASAP3Q8TDY4 903 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 RABGGTAQ92696 567 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 IRF7Q92985 503 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 PRIMPOLQ96LW4 560 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 MTRQ99707 1265 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 LXNQ9BS40 222 aa8.49□□□□□ -1.05
ABCD4-220ENST00000553998 POLR3CQ9BUI4 534 aaPredicted RBP8.49□□□□□ -1.05
ABCD4-220ENST00000553998 APOL6Q9BWW8 343 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms